| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081753
Identifier: 99081753
GI number: 99081753
Start: 2014585
End: 2014797
Strand: Direct
Name: 99081753
Synonym: TM1040_1912
Alternate gene names: NA
Gene position: 2014585-2014797 (Clockwise)
Preceding gene: 99081751
Following gene: 99081754
Centisome position: 62.94
GC content: 61.97
Gene sequence:
>213_bases ATGGCCAACTGCATTGAACACAGCCGTCCCATTCCCCTGCGGCGTCCCTCCCTCCTGTCCACGATCACCCAGATGATCGC CTTGCGCCGCCAGCGGCAGCATCTCGATCGTCTGAGCGATGAACAGCTCAAGGATATTGGTGTGACCCGCGATCAGGCCG AGGCCGAAGCCCGCCGCAAAGCCTGGGATGCACCGAACTTCTGGCTGAGCTGA
Upstream 100 bases:
>100_bases GTTCAAAATCATTCGTTTTGAGAATGAGCCCGCCCAACGTATATCAAGATCAGTGATGCAATCAAGCGCATCCATCACAA TTCAAATTATGGAGCTCCTC
Downstream 100 bases:
>100_bases GGTCACCTCTGTGCCGATCCAGACCCTTGTCAAAACCGAACCGGCCCCGCCCTGCCCTGATGTGGCGCAGCGGGTCCGGT AAAAACTTGTAAATCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MANCIEHSRPIPLRRPSLLSTITQMIALRRQRQHLDRLSDEQLKDIGVTRDQAEAEARRKAWDAPNFWLS
Sequences:
>Translated_70_residues MANCIEHSRPIPLRRPSLLSTITQMIALRRQRQHLDRLSDEQLKDIGVTRDQAEAEARRKAWDAPNFWLS >Mature_69_residues ANCIEHSRPIPLRRPSLLSTITQMIALRRQRQHLDRLSDEQLKDIGVTRDQAEAEARRKAWDAPNFWLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8209; Mature: 8077
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANCIEHSRPIPLRRPSLLSTITQMIALRRQRQHLDRLSDEQLKDIGVTRDQAEAEARRK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH AWDAPNFWLS HCCCCCCCCC >Mature Secondary Structure ANCIEHSRPIPLRRPSLLSTITQMIALRRQRQHLDRLSDEQLKDIGVTRDQAEAEARRK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH AWDAPNFWLS HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA