Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081703

Identifier: 99081703

GI number: 99081703

Start: 1962836

End: 1963474

Strand: Reverse

Name: 99081703

Synonym: TM1040_1862

Alternate gene names: NA

Gene position: 1963474-1962836 (Counterclockwise)

Preceding gene: 99081705

Following gene: 99081702

Centisome position: 61.34

GC content: 68.86

Gene sequence:

>639_bases
GTGTCGCCGAGATATGCGCCGCGCCACAAGGACATCGCCATGGAACTTGATCACTTTGCCATTGCCGCCCCCACACTTTC
AGAGGCCACGGCCTATGTCGAGGAGGCGCTTGGCGTGCCCCTGCAGCCGGGGGGCGCGCATCAGGTCTTTGGCACCCACA
ACCGGCTCCTTGGGCTTGCCGAAGGGCTCTATCTGGAGGCCATCGCCATCGACCCGGAGGCCACGCCGGAGCGTCAGCCG
CGCTGGTTTGATCTCGACCGCTTTGAGGGCGCGGCGCGGATTTCCAACTGGATCTGCCGCAGCACCGATCTGGAGGCCGA
TCTGGCGGCGCTTCCCGTGGAGGCGGGCACGCCGGTTGCACTTACGCGCGGGGATCTCGCGTGGCAGATGGCCGTGCCGG
CCACCGGGTGCCTGCCCTTTGACAATGTCTTTCCTGCGCTGATGCGGTGGCAGGGGCCACATCCCGCGCCGCGCCTCACG
CAACAGGGCTGCAGCCTGCGCCGCCTTGTGGTGGCCCACCCCGAGGCCCGCGCGCTCGCCGAGATGCTGCCGCTTCGGGA
CGCGCGCGTGGTGTTTGAACTGGGCCCCGCCGCGCTCCGGGCAGAGATCGACACGCCGCATGGGCTGCGTCACCTCTGA

Upstream 100 bases:

>100_bases
TCAAGCGTAAAATATCGCGACACGGCATCGGGTTAGGCTAGCGACTTGAACTGACGATATTGGCAGGTCCGTGCTTTTCA
TTGTGGCGGGATTTGCTAGG

Downstream 100 bases:

>100_bases
TGGCACCCCGGATCAGGGCTGCGCGTGACGGCGACACCGAGGCGATCACCCACCTGCAGCGCCACATCATCGACACCACC
CTTGCGACCTTTGCCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSPRYAPRHKDIAMELDHFAIAAPTLSEATAYVEEALGVPLQPGGAHQVFGTHNRLLGLAEGLYLEAIAIDPEATPERQP
RWFDLDRFEGAARISNWICRSTDLEADLAALPVEAGTPVALTRGDLAWQMAVPATGCLPFDNVFPALMRWQGPHPAPRLT
QQGCSLRRLVVAHPEARALAEMLPLRDARVVFELGPAALRAEIDTPHGLRHL

Sequences:

>Translated_212_residues
MSPRYAPRHKDIAMELDHFAIAAPTLSEATAYVEEALGVPLQPGGAHQVFGTHNRLLGLAEGLYLEAIAIDPEATPERQP
RWFDLDRFEGAARISNWICRSTDLEADLAALPVEAGTPVALTRGDLAWQMAVPATGCLPFDNVFPALMRWQGPHPAPRLT
QQGCSLRRLVVAHPEARALAEMLPLRDARVVFELGPAALRAEIDTPHGLRHL
>Mature_211_residues
SPRYAPRHKDIAMELDHFAIAAPTLSEATAYVEEALGVPLQPGGAHQVFGTHNRLLGLAEGLYLEAIAIDPEATPERQPR
WFDLDRFEGAARISNWICRSTDLEADLAALPVEAGTPVALTRGDLAWQMAVPATGCLPFDNVFPALMRWQGPHPAPRLTQ
QGCSLRRLVVAHPEARALAEMLPLRDARVVFELGPAALRAEIDTPHGLRHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23198; Mature: 23067

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRYAPRHKDIAMELDHFAIAAPTLSEATAYVEEALGVPLQPGGAHQVFGTHNRLLGLA
CCCCCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
EGLYLEAIAIDPEATPERQPRWFDLDRFEGAARISNWICRSTDLEADLAALPVEAGTPVA
CCEEEEEEEECCCCCCCCCCCEECHHHHCCHHHHHHHHHCCCCCCCCHHCCCCCCCCCEE
LTRGDLAWQMAVPATGCLPFDNVFPALMRWQGPHPAPRLTQQGCSLRRLVVAHPEARALA
EECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCHHHHHH
EMLPLRDARVVFELGPAALRAEIDTPHGLRHL
HHHCCCCCEEEEEECCHHEEEECCCCCCCCCC
>Mature Secondary Structure 
SPRYAPRHKDIAMELDHFAIAAPTLSEATAYVEEALGVPLQPGGAHQVFGTHNRLLGLA
CCCCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
EGLYLEAIAIDPEATPERQPRWFDLDRFEGAARISNWICRSTDLEADLAALPVEAGTPVA
CCEEEEEEEECCCCCCCCCCCEECHHHHCCHHHHHHHHHCCCCCCCCHHCCCCCCCCCEE
LTRGDLAWQMAVPATGCLPFDNVFPALMRWQGPHPAPRLTQQGCSLRRLVVAHPEARALA
EECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCHHHHHH
EMLPLRDARVVFELGPAALRAEIDTPHGLRHL
HHHCCCCCEEEEEECCHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA