| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081678
Identifier: 99081678
GI number: 99081678
Start: 1937482
End: 1938162
Strand: Direct
Name: 99081678
Synonym: TM1040_1837
Alternate gene names: NA
Gene position: 1937482-1938162 (Clockwise)
Preceding gene: 99081677
Following gene: 99081679
Centisome position: 60.53
GC content: 61.38
Gene sequence:
>681_bases ATGAAGATCGGCATCCTGCAAACCGGCCACGCGCCCGACGAACTGAAGCCCACCTCCGGCAATTACGATGCGATGTTTCG CAAGCTGCTTGCGGGGCATGGCTTCAGCTTTGACACCTATCCCGTACTGGATGGTGTCTTTCCCGAGGGCGCCGAGGCCG CGGATGGCTGGCTCATCACCGGCTCCAAACACGGTGCCTATGAAGACCACGACTGGATCCCGCCGCTTGAGGATCTGATC CGCCAGATCCACGCGCGGAAGATGCCCCTTGTTGGCATCTGTTTTGGTCATCAGATCATCGCGCAGGCACTTGGCGGCAA GGTCGAAAAATTCAGCGGCGGCTGGAGCGTGGGCCACACGCAATACCGCCTGCATGGCGCGCCGGTTGAACTCAATGCCT GGCACCAGGACCAGGTGGTGACACGCCCCGCCGAGGCCCGCGTGATCGGCGAGAGCGATTTTTGCGCCAATGCCTTTCTC GCCTATGGCGACCACATCTGGACCTCGCAGCCGCATCCCGAATTTGAAAACACCTTTGTCGACGGGCTCTTGCGCACGCG CGGCAAAGGCGTGGTCCCCGACGCACAGCTGAACGCGGCCGAGGCCTCCCTCGACCGCCCCACCGACTCCACCCAAATTG CACAAGAGATTGCCGACTTCTTCAAGAAAGTGAGGACCTGA
Upstream 100 bases:
>100_bases CGCCCCCCCGAGAGCCATTGGCTCTCGTGGCTGGAGGCCGTATGACGCGGGGAGCGCCCCTTGCGTCTCACGTCCATGTT TTGATCATATTTGGTGACTT
Downstream 100 bases:
>100_bases TGCCGACCCCGACGCGCTGGCAGGAAAAACTGCCCGAAGCTGCCACGACCTATCTGGAGGGCCGTCGTCTCGACGAGGTT GAATGCGTTATCTCGGACTT
Product: glutamine amidotransferase, class I
Products: NA
Alternate protein names: Glutamine Amidotransferase Class I; Amidotransferase; Glutamine Amidotransferase; Class I Glutamine Amidotransferase; GMP Synthase; GMP Synthase Glutamine Amidotransferase Subunit; GMP Synthase Family Protein; Class I Glutamine Amidotransferase Family Protein; Glutamine Amidotransferase Class-I Family Protein; Guanosine Monophosphate Synthetase; Glutamine Amidotransferase Class-I Family; Glutamine-Hydrolyzing GMP Synthase; GMP Synthase Subunit A
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLITGSKHGAYEDHDWIPPLEDLI RQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHTQYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFL AYGDHIWTSQPHPEFENTFVDGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT
Sequences:
>Translated_226_residues MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLITGSKHGAYEDHDWIPPLEDLI RQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHTQYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFL AYGDHIWTSQPHPEFENTFVDGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT >Mature_226_residues MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLITGSKHGAYEDHDWIPPLEDLI RQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHTQYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFL AYGDHIWTSQPHPEFENTFVDGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323155, Length=213, Percent_Identity=29.1079812206573, Blast_Score=76, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24873; Mature: 24873
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLIT CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEE GSKHGAYEDHDWIPPLEDLIRQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHT CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEECCCCCCCCCE QYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFLAYGDHIWTSQPHPEFENTFV EEEEECCCEEECCCCCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH DGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT HHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLIT CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEE GSKHGAYEDHDWIPPLEDLIRQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHT CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEECCCCCCCCCE QYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFLAYGDHIWTSQPHPEFENTFV EEEEECCCEEECCCCCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH DGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT HHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA