Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081678

Identifier: 99081678

GI number: 99081678

Start: 1937482

End: 1938162

Strand: Direct

Name: 99081678

Synonym: TM1040_1837

Alternate gene names: NA

Gene position: 1937482-1938162 (Clockwise)

Preceding gene: 99081677

Following gene: 99081679

Centisome position: 60.53

GC content: 61.38

Gene sequence:

>681_bases
ATGAAGATCGGCATCCTGCAAACCGGCCACGCGCCCGACGAACTGAAGCCCACCTCCGGCAATTACGATGCGATGTTTCG
CAAGCTGCTTGCGGGGCATGGCTTCAGCTTTGACACCTATCCCGTACTGGATGGTGTCTTTCCCGAGGGCGCCGAGGCCG
CGGATGGCTGGCTCATCACCGGCTCCAAACACGGTGCCTATGAAGACCACGACTGGATCCCGCCGCTTGAGGATCTGATC
CGCCAGATCCACGCGCGGAAGATGCCCCTTGTTGGCATCTGTTTTGGTCATCAGATCATCGCGCAGGCACTTGGCGGCAA
GGTCGAAAAATTCAGCGGCGGCTGGAGCGTGGGCCACACGCAATACCGCCTGCATGGCGCGCCGGTTGAACTCAATGCCT
GGCACCAGGACCAGGTGGTGACACGCCCCGCCGAGGCCCGCGTGATCGGCGAGAGCGATTTTTGCGCCAATGCCTTTCTC
GCCTATGGCGACCACATCTGGACCTCGCAGCCGCATCCCGAATTTGAAAACACCTTTGTCGACGGGCTCTTGCGCACGCG
CGGCAAAGGCGTGGTCCCCGACGCACAGCTGAACGCGGCCGAGGCCTCCCTCGACCGCCCCACCGACTCCACCCAAATTG
CACAAGAGATTGCCGACTTCTTCAAGAAAGTGAGGACCTGA

Upstream 100 bases:

>100_bases
CGCCCCCCCGAGAGCCATTGGCTCTCGTGGCTGGAGGCCGTATGACGCGGGGAGCGCCCCTTGCGTCTCACGTCCATGTT
TTGATCATATTTGGTGACTT

Downstream 100 bases:

>100_bases
TGCCGACCCCGACGCGCTGGCAGGAAAAACTGCCCGAAGCTGCCACGACCTATCTGGAGGGCCGTCGTCTCGACGAGGTT
GAATGCGTTATCTCGGACTT

Product: glutamine amidotransferase, class I

Products: NA

Alternate protein names: Glutamine Amidotransferase Class I; Amidotransferase; Glutamine Amidotransferase; Class I Glutamine Amidotransferase; GMP Synthase; GMP Synthase Glutamine Amidotransferase Subunit; GMP Synthase Family Protein; Class I Glutamine Amidotransferase Family Protein; Glutamine Amidotransferase Class-I Family Protein; Guanosine Monophosphate Synthetase; Glutamine Amidotransferase Class-I Family; Glutamine-Hydrolyzing GMP Synthase; GMP Synthase Subunit A

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLITGSKHGAYEDHDWIPPLEDLI
RQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHTQYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFL
AYGDHIWTSQPHPEFENTFVDGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT

Sequences:

>Translated_226_residues
MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLITGSKHGAYEDHDWIPPLEDLI
RQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHTQYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFL
AYGDHIWTSQPHPEFENTFVDGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT
>Mature_226_residues
MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLITGSKHGAYEDHDWIPPLEDLI
RQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHTQYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFL
AYGDHIWTSQPHPEFENTFVDGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323155, Length=213, Percent_Identity=29.1079812206573, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24873; Mature: 24873

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLIT
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEE
GSKHGAYEDHDWIPPLEDLIRQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHT
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEECCCCCCCCCE
QYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFLAYGDHIWTSQPHPEFENTFV
EEEEECCCEEECCCCCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
DGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT
HHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLDGVFPEGAEAADGWLIT
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEE
GSKHGAYEDHDWIPPLEDLIRQIHARKMPLVGICFGHQIIAQALGGKVEKFSGGWSVGHT
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEECCCCCCCCCE
QYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFLAYGDHIWTSQPHPEFENTFV
EEEEECCCEEECCCCCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
DGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIADFFKKVRT
HHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA