| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081651
Identifier: 99081651
GI number: 99081651
Start: 1902340
End: 1902666
Strand: Reverse
Name: 99081651
Synonym: TM1040_1810
Alternate gene names: NA
Gene position: 1902666-1902340 (Counterclockwise)
Preceding gene: 99081652
Following gene: 99081647
Centisome position: 59.44
GC content: 64.22
Gene sequence:
>327_bases GTGGCCGGGCGTTTTCGTCAAGCGGCGTGTCTGCGCCGCCTAGCGGTGCCGTCGCGGGCACCACGTCTGGCTGGCGGCGC GGCCTCAGGCTGTGCGCGGGCGCGACAGCAGCAGAGCCGGGGCTTTGATCGCGCGAAGGAGCGCGGTGCCAATGCTGGAG AGGATGAGGCTCATCATTTCGGCACGCAGTTTGCGCGCGCGCAGTTCGATTGCTCTCAGCTCGTCAATATCCAGCGGGGT GGTTTCATTCAGGTCCATTGCTTCACCTTGGGGTGTTTCATTGATGGGGCTGATCTAGACCATCGCTGCGGGCGCGACAT CGCATAG
Upstream 100 bases:
>100_bases CTTTGCCCCTCTGCGCGGATGCGCATTCACCCCAGGATATTTTTCGTTAGAAGAAGGTGGGGGACGTGCGACGTGGAAAA AGAGAAACGCCCGGGCCTGT
Downstream 100 bases:
>100_bases CTTGGCATTGCCGCTATGCCGCTGCTGCAATGCCGCGTCATGTGACTGTGATGCAGGCTATGATGCAGGCTGTGATGTAG GGCGCATTGGCGGCCTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAGRFRQAACLRRLAVPSRAPRLAGGAASGCARARQQQSRGFDRAKERGANAGEDEAHHFGTQFARAQFDCSQLVNIQRG GFIQVHCFTLGCFIDGADLDHRCGRDIA
Sequences:
>Translated_108_residues MAGRFRQAACLRRLAVPSRAPRLAGGAASGCARARQQQSRGFDRAKERGANAGEDEAHHFGTQFARAQFDCSQLVNIQRG GFIQVHCFTLGCFIDGADLDHRCGRDIA >Mature_107_residues AGRFRQAACLRRLAVPSRAPRLAGGAASGCARARQQQSRGFDRAKERGANAGEDEAHHFGTQFARAQFDCSQLVNIQRGG FIQVHCFTLGCFIDGADLDHRCGRDIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11734; Mature: 11603
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRFRQAACLRRLAVPSRAPRLAGGAASGCARARQQQSRGFDRAKERGANAGEDEAHHF CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHH GTQFARAQFDCSQLVNIQRGGFIQVHCFTLGCFIDGADLDHRCGRDIA HHHHHHHHHCHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure AGRFRQAACLRRLAVPSRAPRLAGGAASGCARARQQQSRGFDRAKERGANAGEDEAHHF CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHH GTQFARAQFDCSQLVNIQRGGFIQVHCFTLGCFIDGADLDHRCGRDIA HHHHHHHHHCHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA