Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081595

Identifier: 99081595

GI number: 99081595

Start: 1846069

End: 1846413

Strand: Direct

Name: 99081595

Synonym: TM1040_1754

Alternate gene names: NA

Gene position: 1846069-1846413 (Clockwise)

Preceding gene: 99081594

Following gene: 99081597

Centisome position: 57.67

GC content: 56.52

Gene sequence:

>345_bases
ATGCGGAATTTCGGATGCGCGACACCACATTGGACGGGCCTTCACGGCACGTCATACCAAATTCAAGATGAGAACATGAT
AGAGATTTTTTGGGGACCGAAGATGGTCCTGACCGAGATTGAAACCGGAACTCAAGAGGCCTTTGGCACCATTGAAAAGG
CGCACCATTGGCTCAGCCGCAAATGGCCTGTTGCAGATTCCGCGGCCCGAGCTGCACTGGCCCAAGTCGAAGCCGCGATG
GAATGCATGGGGTCCGTGCAGGACGCAAGATCGGCATTTCAAGACGCCGCCTGCAGCGCCGGGTTTCACATTGCAGATCA
AAGCGCGCAGCCCCTGGCGTCATAG

Upstream 100 bases:

>100_bases
AGGATAGCGACGCACCTTCTTCGAGAAAGCACTGAAGACTGGGGGGATATCTCGGCCCTCCGTTGCCCTCACCTGCGCGC
GCCTACATACGCCCCCGCTC

Downstream 100 bases:

>100_bases
ACGCAGCGGGCGTGCAAGGCTTTCAGCTGAAAGAAACAGCGGCCCCGCCCTCGTCGTGCAACAGACCGCAGAGGTCAATT
GGGATCATTGGGAGGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MRNFGCATPHWTGLHGTSYQIQDENMIEIFWGPKMVLTEIETGTQEAFGTIEKAHHWLSRKWPVADSAARAALAQVEAAM
ECMGSVQDARSAFQDAACSAGFHIADQSAQPLAS

Sequences:

>Translated_114_residues
MRNFGCATPHWTGLHGTSYQIQDENMIEIFWGPKMVLTEIETGTQEAFGTIEKAHHWLSRKWPVADSAARAALAQVEAAM
ECMGSVQDARSAFQDAACSAGFHIADQSAQPLAS
>Mature_114_residues
MRNFGCATPHWTGLHGTSYQIQDENMIEIFWGPKMVLTEIETGTQEAFGTIEKAHHWLSRKWPVADSAARAALAQVEAAM
ECMGSVQDARSAFQDAACSAGFHIADQSAQPLAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12425; Mature: 12425

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFGCATPHWTGLHGTSYQIQDENMIEIFWGPKMVLTEIETGTQEAFGTIEKAHHWLSR
CCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHC
KWPVADSAARAALAQVEAAMECMGSVQDARSAFQDAACSAGFHIADQSAQPLAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRNFGCATPHWTGLHGTSYQIQDENMIEIFWGPKMVLTEIETGTQEAFGTIEKAHHWLSR
CCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHC
KWPVADSAARAALAQVEAAMECMGSVQDARSAFQDAACSAGFHIADQSAQPLAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA