| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081530
Identifier: 99081530
GI number: 99081530
Start: 1783760
End: 1784104
Strand: Direct
Name: 99081530
Synonym: TM1040_1689
Alternate gene names: NA
Gene position: 1783760-1784104 (Clockwise)
Preceding gene: 99081529
Following gene: 99081531
Centisome position: 55.73
GC content: 57.97
Gene sequence:
>345_bases ATGCATGACGCTATGAACAAGGCCCAAAAAGCCACTCAATATCTGATCGATAGCGCGGCAGAGATAGCTGCTGCCAAGGC CGACCTCACTAAAGCGGAAAACATGCTTCGCGTGGTGAAGGCAATGGCAATGAAGCACAGCGACGAAAAGAGCGCTGCGG CCCAAGAGCGAGAGGCATATGCGAGCCAGCAGTATCTCTCAGCCGTGAACGAGCTGGCTCTCGTGGCTGGCGAATACGAG AAGCTGCGCGCACTACGAGAGGCCGCGAAACAGCAGATCGAGTTTTGGCGTAGCCTGAACGCCAACCAGCGCGCCGCTGA GCGCGGTTACGGGAGCGCAGCATGA
Upstream 100 bases:
>100_bases ATCATGACGCCCTGATTGCAGAGGTTGCGCTCGAGTTTCGCATGAGCATTCGCATCCTCAATGACGCCGTGAAATCCGAA ACAATCACGAGGCCGAACTG
Downstream 100 bases:
>100_bases CACGCCCTGTTGCCGAATGGATCGGCAAAACCGACGCCACCCCTGCCCCGGCTCGCGTAAAGGCACGGATCATCATGGCG CAGGATGGCATCTGCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MHDAMNKAQKATQYLIDSAAEIAAAKADLTKAENMLRVVKAMAMKHSDEKSAAAQEREAYASQQYLSAVNELALVAGEYE KLRALREAAKQQIEFWRSLNANQRAAERGYGSAA
Sequences:
>Translated_114_residues MHDAMNKAQKATQYLIDSAAEIAAAKADLTKAENMLRVVKAMAMKHSDEKSAAAQEREAYASQQYLSAVNELALVAGEYE KLRALREAAKQQIEFWRSLNANQRAAERGYGSAA >Mature_114_residues MHDAMNKAQKATQYLIDSAAEIAAAKADLTKAENMLRVVKAMAMKHSDEKSAAAQEREAYASQQYLSAVNELALVAGEYE KLRALREAAKQQIEFWRSLNANQRAAERGYGSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12548; Mature: 12548
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDAMNKAQKATQYLIDSAAEIAAAKADLTKAENMLRVVKAMAMKHSDEKSAAAQEREAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ASQQYLSAVNELALVAGEYEKLRALREAAKQQIEFWRSLNANQRAAERGYGSAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC >Mature Secondary Structure MHDAMNKAQKATQYLIDSAAEIAAAKADLTKAENMLRVVKAMAMKHSDEKSAAAQEREAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ASQQYLSAVNELALVAGEYEKLRALREAAKQQIEFWRSLNANQRAAERGYGSAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA