| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081492
Identifier: 99081492
GI number: 99081492
Start: 1753773
End: 1754207
Strand: Reverse
Name: 99081492
Synonym: TM1040_1651
Alternate gene names: NA
Gene position: 1754207-1753773 (Counterclockwise)
Preceding gene: 99081493
Following gene: 99081491
Centisome position: 54.8
GC content: 61.84
Gene sequence:
>435_bases ATGACGTGGGGCAAGTTTATCGTCGGGGCTTGGGGCGCCGTGCTTGCGCTGAGCCTTATGACCAGTGCGCTACCCGCGAG CTGGTGGTTTCAGGCTGGGGAAGTGCGCGTTGCCGACGCTTCATCCGGTGAGTGTCCGGAAATGCAGTTTGATCGCGAGA TCAACCGGCCATTCAAGGCCGCCTGGACCGTTACCATCATGGGGCGCGCCTCCTATGGCTGGGCCACCTATCGCACCTTT CAGGGCGCCAATGACTATCGGCCGGAAAACCAGCTTCCGGACAAGCTCGATCTTTGCTGGTGGACGTGGGCGGATCCGCT TCACCTGCCACCGGGGGAATACCGTGTGAACACTCTCTGGCGCATCCATCCGACACAGGGCAGGGCGCGCGAGATCAGGC GCACCAGCAACACATTCACGATCAGCGGAGGCTAG
Upstream 100 bases:
>100_bases CAGTTTGCGCCCTGATCGCGCTGACCGGTGAGCATATCGCCCGACAGATCCTTTCCCTCGGCATTGAGGATGCCGTCCGA CTTCTGCGGGGGAACAAGAA
Downstream 100 bases:
>100_bases AATGCAGAAGAACTTCGACCGAAGCCTTGATTGGGTTCTGGCCCATGAAGGCGGTTATGTGAACCATCCCAAGGATCCGG GGGGAGCCACGAATATGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTWGKFIVGAWGAVLALSLMTSALPASWWFQAGEVRVADASSGECPEMQFDREINRPFKAAWTVTIMGRASYGWATYRTF QGANDYRPENQLPDKLDLCWWTWADPLHLPPGEYRVNTLWRIHPTQGRAREIRRTSNTFTISGG
Sequences:
>Translated_144_residues MTWGKFIVGAWGAVLALSLMTSALPASWWFQAGEVRVADASSGECPEMQFDREINRPFKAAWTVTIMGRASYGWATYRTF QGANDYRPENQLPDKLDLCWWTWADPLHLPPGEYRVNTLWRIHPTQGRAREIRRTSNTFTISGG >Mature_143_residues TWGKFIVGAWGAVLALSLMTSALPASWWFQAGEVRVADASSGECPEMQFDREINRPFKAAWTVTIMGRASYGWATYRTFQ GANDYRPENQLPDKLDLCWWTWADPLHLPPGEYRVNTLWRIHPTQGRAREIRRTSNTFTISGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16426; Mature: 16294
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWGKFIVGAWGAVLALSLMTSALPASWWFQAGEVRVADASSGECPEMQFDREINRPFKA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCCCCHHCCCCEEE AWTVTIMGRASYGWATYRTFQGANDYRPENQLPDKLDLCWWTWADPLHLPPGEYRVNTLW EEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE RIHPTQGRAREIRRTSNTFTISGG EEECCCCHHHHHHHCCCEEEEECC >Mature Secondary Structure TWGKFIVGAWGAVLALSLMTSALPASWWFQAGEVRVADASSGECPEMQFDREINRPFKA CCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCCCCHHCCCCEEE AWTVTIMGRASYGWATYRTFQGANDYRPENQLPDKLDLCWWTWADPLHLPPGEYRVNTLW EEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE RIHPTQGRAREIRRTSNTFTISGG EEECCCCHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA