| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081487
Identifier: 99081487
GI number: 99081487
Start: 1751144
End: 1751659
Strand: Direct
Name: 99081487
Synonym: TM1040_1646
Alternate gene names: NA
Gene position: 1751144-1751659 (Clockwise)
Preceding gene: 99081485
Following gene: 99081499
Centisome position: 54.71
GC content: 55.43
Gene sequence:
>516_bases ATGCCAAGATCAGAGATTTGCAAAAACTGCTGCCCGAATGGCGGAGCCCTCTTTGACCTGAAGTACGGAGAGTTCGAAGA CTTCGACACGGGCGAAGTCATGGCCGAGCCAGGCTACCGGAAAATTTGCAGGAACTGCGGGTACGCAAAGAAGGTTCGCA AACGGAAGCCTCGCCCGACCATCGACCAGATCTGCCAAATGCAAAGCCCGGAAGGCTTGCGCAATTGCAAGGATCTGGGC CGCTTCCACTACTTTGCAGAGGCGGGAGTGTGGAAGAAGCTGCAAAGCGTTTGCGACCGATACGCAGAGCTTGCGCGGGA AAGAGGCATCACCAAGTATCCTCTTTTCCTGCACTGGCGATACAACCGTCACGATGCTGAAGCCCTTTACAAGGAAATCA GCAAGTCAAGGTCCAATGCGAGGCAGGTGCGGATCCGCATCAGCCAACTGCAGGACCTTTTGGAGCGCGCTGAGGTGGCG CTCAAGAATGACTTTCAGATGAAGGCCGCAGCGTGA
Upstream 100 bases:
>100_bases CTAATCTGGACTAACTATCTAGACAGGTCAACTGCAGCGCGATACAGTCCAGAAACATAGTCTTGTTACCAGTTCCGCGC CGCCTGAAAAGGAGCCTTAA
Downstream 100 bases:
>100_bases TGAGCAGTGCCGCCCACGATGCCGTCGAATCCCAGGCGACCATGAAGCGCAGGAAGAAACATAGGCGCGAGAAAGTTTGG TTCATGAAAGGCGCAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPRSEICKNCCPNGGALFDLKYGEFEDFDTGEVMAEPGYRKICRNCGYAKKVRKRKPRPTIDQICQMQSPEGLRNCKDLG RFHYFAEAGVWKKLQSVCDRYAELARERGITKYPLFLHWRYNRHDAEALYKEISKSRSNARQVRIRISQLQDLLERAEVA LKNDFQMKAAA
Sequences:
>Translated_171_residues MPRSEICKNCCPNGGALFDLKYGEFEDFDTGEVMAEPGYRKICRNCGYAKKVRKRKPRPTIDQICQMQSPEGLRNCKDLG RFHYFAEAGVWKKLQSVCDRYAELARERGITKYPLFLHWRYNRHDAEALYKEISKSRSNARQVRIRISQLQDLLERAEVA LKNDFQMKAAA >Mature_170_residues PRSEICKNCCPNGGALFDLKYGEFEDFDTGEVMAEPGYRKICRNCGYAKKVRKRKPRPTIDQICQMQSPEGLRNCKDLGR FHYFAEAGVWKKLQSVCDRYAELARERGITKYPLFLHWRYNRHDAEALYKEISKSRSNARQVRIRISQLQDLLERAEVAL KNDFQMKAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19960; Mature: 19829
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSEICKNCCPNGGALFDLKYGEFEDFDTGEVMAEPGYRKICRNCGYAKKVRKRKPRPT CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHCCCHHHHHHHCCCCCC IDQICQMQSPEGLRNCKDLGRFHYFAEAGVWKKLQSVCDRYAELARERGITKYPLFLHWR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE YNRHDAEALYKEISKSRSNARQVRIRISQLQDLLERAEVALKNDFQMKAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure PRSEICKNCCPNGGALFDLKYGEFEDFDTGEVMAEPGYRKICRNCGYAKKVRKRKPRPT CHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHCCCHHHHHHHCCCCCC IDQICQMQSPEGLRNCKDLGRFHYFAEAGVWKKLQSVCDRYAELARERGITKYPLFLHWR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE YNRHDAEALYKEISKSRSNARQVRIRISQLQDLLERAEVALKNDFQMKAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA