| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081453
Identifier: 99081453
GI number: 99081453
Start: 1724207
End: 1724542
Strand: Reverse
Name: 99081453
Synonym: TM1040_1612
Alternate gene names: NA
Gene position: 1724542-1724207 (Counterclockwise)
Preceding gene: 99081454
Following gene: 99081452
Centisome position: 53.88
GC content: 60.71
Gene sequence:
>336_bases TTGCCCGATGTCTCCGGGGTCGAATACCTTCTGGACATCATGGCTCCAGAGGGTATCGGCTGGTGCACCTTTGACCACAT GGGGGGCGCGCAGCCGATTGAATGGTCCGAGATCCGGTCGTTCTCGAAAGAGGCAGGCATATACCTGGAGCCTTGGGAGT CTAGCCAGCTGCGGGCGATGAGTGTTGCCTACGTCAACGGACTGGCGCGGGGCAGGGAGCCGATGAAGGTCTCCCCGGCA TATGATGACAGACCGGATGAAGATCCGGGCGTGGCGCTGGAGCAAAAGAGACTGTCTGACAACCTGGGCGCAGCGCTTTC AGCACTCGCGGGTTAG
Upstream 100 bases:
>100_bases GACGCTTTACGCAGCCCAGGCCGGGTTCCTTGCAGCAAGGCCTGAAGAATGGAAAACCAGCCGCTTCAAGCTCTGGCAGA GAGAGGGGATCGACCTCGCA
Downstream 100 bases:
>100_bases TTCCAGTGTTGCTGTCACCCTAGCTCTTGAGGTCGAATGACTTCCGCCGCGACCGTCGGCACAGAGTACTCAACCGTCGG CTTTAACTCGCTACCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPDVSGVEYLLDIMAPEGIGWCTFDHMGGAQPIEWSEIRSFSKEAGIYLEPWESSQLRAMSVAYVNGLARGREPMKVSPA YDDRPDEDPGVALEQKRLSDNLGAALSALAG
Sequences:
>Translated_111_residues MPDVSGVEYLLDIMAPEGIGWCTFDHMGGAQPIEWSEIRSFSKEAGIYLEPWESSQLRAMSVAYVNGLARGREPMKVSPA YDDRPDEDPGVALEQKRLSDNLGAALSALAG >Mature_110_residues PDVSGVEYLLDIMAPEGIGWCTFDHMGGAQPIEWSEIRSFSKEAGIYLEPWESSQLRAMSVAYVNGLARGREPMKVSPAY DDRPDEDPGVALEQKRLSDNLGAALSALAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12088; Mature: 11956
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVSGVEYLLDIMAPEGIGWCTFDHMGGAQPIEWSEIRSFSKEAGIYLEPWESSQLRAM CCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCHHHH SVAYVNGLARGREPMKVSPAYDDRPDEDPGVALEQKRLSDNLGAALSALAG HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDVSGVEYLLDIMAPEGIGWCTFDHMGGAQPIEWSEIRSFSKEAGIYLEPWESSQLRAM CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCHHHH SVAYVNGLARGREPMKVSPAYDDRPDEDPGVALEQKRLSDNLGAALSALAG HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA