Click here to switch to the map view.

The map label for this gene is 99081424

Identifier: 99081424

GI number: 99081424

Start: 1692230

End: 1692826

Strand: Reverse

Name: 99081424

Synonym: TM1040_1583

Alternate gene names: NA

Gene position: 1692826-1692230 (Counterclockwise)

Preceding gene: 99081426

Following gene: 99081423

Centisome position: 52.89

GC content: 61.64

Gene sequence:

>597_bases
ATGACATCCAAGGCAGAGCAGCGCAGGGCGGAGCTGCGCGAAAAACTGGTGGGCGCTGCAGAGGCGCGCATTCGCGAGGC
TGGCGTGACATCGCTGCGGGCGCGTGATCTGGCCAAGGATGCGGGCTGCGCGGTTGGGGCGATCTACAACGCCTTTGACG
ATCTGACGGCCTTGGTGATGGCGGTCAACGGGCGCACGTTTCAGCGTCTCGGGGCCGAGGTTGAAGCCGCGGTCAAAGCC
TCCGAAGGGGCCTCGCCCAGCGACAGGCTGATCCGAATGAGCGAAGCCTATCTGGATTTTGCAAGTGCAAACAATCTCTT
GTGGCGCGCTCTGTTTGACCTGGAACTCCCCGCCGATGGGGAGGTGCCTGATTGGTATCGCGCCGCATTGGATCGGCTGT
TTCAGCACATTGCCGGTCCTGTGGCCGAACTTTTCCCAGATCAGCCGCAGCAGGAACAGGCGCTCACGGTGCGGGCGCTG
TTTTCCTCGGTGCATGGGATTGTCTTGCTGGGGCTCGAAAATCGTATTTCGGGCGTCCCGCCGCAAGAAATCCGGCGCAT
GATTGCGCTGGTGTTGTCGCGCCTGACGATGAAGTAA

Upstream 100 bases:

>100_bases
CTCCAAGATCAGTCACCGCACGGCGAGGATTTGCATTCCCGGACTGCGGCAGCCTATAGAGAGGGGGACATGAACGCGGT
TCAAGAAATGGGCGAATAAA

Downstream 100 bases:

>100_bases
ATCTCCAATTCCGTGAACGCTGTTCATTTTTAGCTTGAACGACGTTCACAAATACCGTACATCCCCCTTATGAACAATGT
TCACGAATGGAGGATGGAAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTSKAEQRRAELREKLVGAAEARIREAGVTSLRARDLAKDAGCAVGAIYNAFDDLTALVMAVNGRTFQRLGAEVEAAVKA
SEGASPSDRLIRMSEAYLDFASANNLLWRALFDLELPADGEVPDWYRAALDRLFQHIAGPVAELFPDQPQQEQALTVRAL
FSSVHGIVLLGLENRISGVPPQEIRRMIALVLSRLTMK

Sequences:

>Translated_198_residues
MTSKAEQRRAELREKLVGAAEARIREAGVTSLRARDLAKDAGCAVGAIYNAFDDLTALVMAVNGRTFQRLGAEVEAAVKA
SEGASPSDRLIRMSEAYLDFASANNLLWRALFDLELPADGEVPDWYRAALDRLFQHIAGPVAELFPDQPQQEQALTVRAL
FSSVHGIVLLGLENRISGVPPQEIRRMIALVLSRLTMK
>Mature_197_residues
TSKAEQRRAELREKLVGAAEARIREAGVTSLRARDLAKDAGCAVGAIYNAFDDLTALVMAVNGRTFQRLGAEVEAAVKAS
EGASPSDRLIRMSEAYLDFASANNLLWRALFDLELPADGEVPDWYRAALDRLFQHIAGPVAELFPDQPQQEQALTVRALF
SSVHGIVLLGLENRISGVPPQEIRRMIALVLSRLTMK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21702; Mature: 21571

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKAEQRRAELREKLVGAAEARIREAGVTSLRARDLAKDAGCAVGAIYNAFDDLTALVM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AVNGRTFQRLGAEVEAAVKASEGASPSDRLIRMSEAYLDFASANNLLWRALFDLELPADG
HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVPDWYRAALDRLFQHIAGPVAELFPDQPQQEQALTVRALFSSVHGIVLLGLENRISGVP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECHHHCCCCC
PQEIRRMIALVLSRLTMK
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSKAEQRRAELREKLVGAAEARIREAGVTSLRARDLAKDAGCAVGAIYNAFDDLTALVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AVNGRTFQRLGAEVEAAVKASEGASPSDRLIRMSEAYLDFASANNLLWRALFDLELPADG
HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVPDWYRAALDRLFQHIAGPVAELFPDQPQQEQALTVRALFSSVHGIVLLGLENRISGVP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECHHHCCCCC
PQEIRRMIALVLSRLTMK
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA