Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081378

Identifier: 99081378

GI number: 99081378

Start: 1643486

End: 1644013

Strand: Reverse

Name: 99081378

Synonym: TM1040_1537

Alternate gene names: NA

Gene position: 1644013-1643486 (Counterclockwise)

Preceding gene: 99081386

Following gene: 99081377

Centisome position: 51.36

GC content: 64.77

Gene sequence:

>528_bases
ATGGCTGTGATAAATTGGATCCGCAAAGACTTGGATATGCAAATGAAACAGGATCACACTCGCACGCCCCCCTCGACGCG
ATCCTCCCGCCGCGTGTTTCTTTTGGGCGGCGGCGCTCTACTGCTTGGGGCAGGGGGCTGGTGGGGGCTGTCGCGACACC
GTCCCACCCATGAAGGCCGGATCCTCTCGGTCGCGCAGGCCCACAAGGACGCGCAGACGGGCGAGATCCTGCTCCTTGAC
ATTCGCACCCCCTCTGAATGGCGCCAGACCGGCATCCCTGAAGGGGCAGTCCCCCTAGATATGCGCCGGGCGGATTTTCA
GGAGGCGCTACGCGCACTTCAGGTGCAGGACCCCGGTCGCCCGGTGGCCTTGATCTGCGCCGGAGGCGTGCGCTCGGCGC
GGCTCACCCGACAGTTGCTTGCGTCGGGATTTGAGGACATCATCGATGTCCCGGAAGGCGTCTATGGATCCACTGCCGGG
CCGGGCTGGCTCAGCAGCAACCTGCCGGTGCGCCCATGGACAGGATGA

Upstream 100 bases:

>100_bases
CAGGAGCCCGCTCGGGTCAGCGTATTGTGACGCTGGACCGGGTGACTTCAGATGACGCGATCTTGAAGTCCGGCCGCGAT
CTTCTGCGCACATCCGCCGG

Downstream 100 bases:

>100_bases
TCCCGCTACTGGCCACGATTGCCACCCTCACGCTTGTCGAAGGTGCCGCCGCCTGTGATACGCCAGAGACCGCCTGCAGA
CTGGACACTGGCAGCTACCA

Product: rhodanese-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAVINWIRKDLDMQMKQDHTRTPPSTRSSRRVFLLGGGALLLGAGGWWGLSRHRPTHEGRILSVAQAHKDAQTGEILLLD
IRTPSEWRQTGIPEGAVPLDMRRADFQEALRALQVQDPGRPVALICAGGVRSARLTRQLLASGFEDIIDVPEGVYGSTAG
PGWLSSNLPVRPWTG

Sequences:

>Translated_175_residues
MAVINWIRKDLDMQMKQDHTRTPPSTRSSRRVFLLGGGALLLGAGGWWGLSRHRPTHEGRILSVAQAHKDAQTGEILLLD
IRTPSEWRQTGIPEGAVPLDMRRADFQEALRALQVQDPGRPVALICAGGVRSARLTRQLLASGFEDIIDVPEGVYGSTAG
PGWLSSNLPVRPWTG
>Mature_174_residues
AVINWIRKDLDMQMKQDHTRTPPSTRSSRRVFLLGGGALLLGAGGWWGLSRHRPTHEGRILSVAQAHKDAQTGEILLLDI
RTPSEWRQTGIPEGAVPLDMRRADFQEALRALQVQDPGRPVALICAGGVRSARLTRQLLASGFEDIIDVPEGVYGSTAGP
GWLSSNLPVRPWTG

Specific function: Unknown

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19163; Mature: 19032

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVINWIRKDLDMQMKQDHTRTPPSTRSSRRVFLLGGGALLLGAGGWWGLSRHRPTHEGR
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCC
ILSVAQAHKDAQTGEILLLDIRTPSEWRQTGIPEGAVPLDMRRADFQEALRALQVQDPGR
EEEHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PVALICAGGVRSARLTRQLLASGFEDIIDVPEGVYGSTAGPGWLSSNLPVRPWTG
CEEEEEECCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVINWIRKDLDMQMKQDHTRTPPSTRSSRRVFLLGGGALLLGAGGWWGLSRHRPTHEGR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCC
ILSVAQAHKDAQTGEILLLDIRTPSEWRQTGIPEGAVPLDMRRADFQEALRALQVQDPGR
EEEHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PVALICAGGVRSARLTRQLLASGFEDIIDVPEGVYGSTAGPGWLSSNLPVRPWTG
CEEEEEECCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA