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The map label for this gene is ssb [H]

Identifier: 99081266

GI number: 99081266

Start: 1521186

End: 1521710

Strand: Direct

Name: ssb [H]

Synonym: TM1040_1425

Alternate gene names: 99081266

Gene position: 1521186-1521710 (Clockwise)

Preceding gene: 99081261

Following gene: 99081272

Centisome position: 47.52

GC content: 63.62

Gene sequence:

>525_bases
ATGGCCGGATCCCTGAACAAAGTAATGTTGATCGGCAACCTTGGCCGCGACCCCGAGGTGCGCAGCTTCCAGAACGGTGG
CAAGGTCTGCAACCTGCGGATTGCGACCTCCGAAACCTGGAAAGACCGCAACACCGGCGAGCGCCGCGAGAAGACCGAGT
GGCACTCGGTTGCGATCTTCAACGAAGGTCTGGTGCGTGTGGCAGAGCAATATCTGCGCAAAGGGTCCAAGGTCTATGTC
GAAGGTCAGCTGCAGACCCGCAAGTGGCAAGACCAGAGCGGCCAGGATCGCTATTCTACTGAGGTTGTGCTGCAGGGCTT
TGGCTCCACACTCACCATGCTCGACGGTCGTGGCGAAGGCGGCGGTGGCGGCTTTGGCGGTGGTCAGGGCGGCGGCGACT
ACGGTGGCGGCGGGGGCGGCTACGGTGGTGGCGGCAGCTATGGCGGCGGCGGTGGCAACCAGGGCGGTGGCTTTGGCGGC
GGTGGCCCCTCGCAAAACATCGACGACGACGAAATCCCGTTCTGA

Upstream 100 bases:

>100_bases
TTACTCTGACCCGCAGACAGCGAGCGGGATTCGACATCACGCTCTGGCGATGCCTCGCACTCGCTCCGAAATAGATAAGA
AAACAAAGGACAGGACCCCC

Downstream 100 bases:

>100_bases
TCGTCGCGCGTTTTGGAAACGCTCCGCGAGATACAAATCTCGCCAGGAACAAGAAGGCCCGACAGACGTCGGGCCTTCTT
CTTTAAATCAATACGTTACC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAGSLNKVMLIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSKVYV
EGQLQTRKWQDQSGQDRYSTEVVLQGFGSTLTMLDGRGEGGGGGFGGGQGGGDYGGGGGGYGGGGSYGGGGGNQGGGFGG
GGPSQNIDDDEIPF

Sequences:

>Translated_174_residues
MAGSLNKVMLIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSKVYV
EGQLQTRKWQDQSGQDRYSTEVVLQGFGSTLTMLDGRGEGGGGGFGGGQGGGDYGGGGGGYGGGGSYGGGGGNQGGGFGG
GGPSQNIDDDEIPF
>Mature_173_residues
AGSLNKVMLIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSKVYVE
GQLQTRKWQDQSGQDRYSTEVVLQGFGSTLTMLDGRGEGGGGGFGGGQGGGDYGGGGGGYGGGGSYGGGGGNQGGGFGGG
GPSQNIDDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=9e-14,
Organism=Escherichia coli, GI1790494, Length=175, Percent_Identity=49.7142857142857, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18092; Mature: 17961

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSLNKVMLIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIF
CCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHCCHHEEEEE
NEGLVRVAEQYLRKGSKVYVEGQLQTRKWQDQSGQDRYSTEVVLQGFGSTLTMLDGRGEG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
GGGGFGGGQGGGDYGGGGGGYGGGGSYGGGGGNQGGGFGGGGPSQNIDDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSLNKVMLIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIF
CCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHCCHHEEEEE
NEGLVRVAEQYLRKGSKVYVEGQLQTRKWQDQSGQDRYSTEVVLQGFGSTLTMLDGRGEG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
GGGGFGGGQGGGDYGGGGGGYGGGGSYGGGGGNQGGGFGGGGPSQNIDDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA