Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is pgpA [H]

Identifier: 99081206

GI number: 99081206

Start: 1460047

End: 1460544

Strand: Direct

Name: pgpA [H]

Synonym: TM1040_1365

Alternate gene names: 99081206

Gene position: 1460047-1460544 (Clockwise)

Preceding gene: 99081205

Following gene: 99081207

Centisome position: 45.61

GC content: 60.84

Gene sequence:

>498_bases
ATGACACTTCCACAACTTCTCGGAACCTGTTGCGGAATAGGGTATTTTCGCCCTGCGCCCGGAACCTGGGGGTCACTGGC
CGCGCTGCCGTTGACCTATGTGTTGCATGTCACGGGTGGCTTTCCTCTGCTCGCCGTTTTTACCGTGGCCTCTGTTCTTG
TGGGCCTGTGGGCGGCCAAGGAAATGACCCGCGGCCAGGAAGATCTGGACCCTTCGGAATTCGTGCTGGATGAGCTCGCG
GGGCAGATGCTTGCGCTCTGGGCCATATCTCTGCCGGCCTGGTTGCATGGACTGGAGATCACCGCGCTCTGGCCCGGTTG
GGTCGCAGGATTTTTGCTGTTTCGGCTCTTTGATATCTGGAAGCCCGGGCCGGTGGGCTGGGCGGACCGCAAGAAAGGTC
CCTTTGGCGTTGTCATGGACGATGTCATAGCCGGTGGTATGGCCGCGGTAGGGGTCGCGATGCTTGCAGGCCTCTCCCAT
GGGGTGCTTGGGCTATGA

Upstream 100 bases:

>100_bases
TGGGACGCCTCTCGATCAAGGCGACAACTTCAGAGCGGCTTGGGTTCACCGGTCGCAAAGAAGGCATCGCGGCACTGGCG
ACAGCAACATTGGTGCGGGC

Downstream 100 bases:

>100_bases
ATATCAAAGACTTACTTCGCGCAGCTCAATCAAAGAATGCCACCATCGCCACAGCCGAAAGCTGCACCGGAGGCATGGTT
GCGGCGGCGCTCACGGATAT

Product: phosphatidylglycerophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTLPQLLGTCCGIGYFRPAPGTWGSLAALPLTYVLHVTGGFPLLAVFTVASVLVGLWAAKEMTRGQEDLDPSEFVLDELA
GQMLALWAISLPAWLHGLEITALWPGWVAGFLLFRLFDIWKPGPVGWADRKKGPFGVVMDDVIAGGMAAVGVAMLAGLSH
GVLGL

Sequences:

>Translated_165_residues
MTLPQLLGTCCGIGYFRPAPGTWGSLAALPLTYVLHVTGGFPLLAVFTVASVLVGLWAAKEMTRGQEDLDPSEFVLDELA
GQMLALWAISLPAWLHGLEITALWPGWVAGFLLFRLFDIWKPGPVGWADRKKGPFGVVMDDVIAGGMAAVGVAMLAGLSH
GVLGL
>Mature_164_residues
TLPQLLGTCCGIGYFRPAPGTWGSLAALPLTYVLHVTGGFPLLAVFTVASVLVGLWAAKEMTRGQEDLDPSEFVLDELAG
QMLALWAISLPAWLHGLEITALWPGWVAGFLLFRLFDIWKPGPVGWADRKKGPFGVVMDDVIAGGMAAVGVAMLAGLSHG
VLGL

Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786620, Length=147, Percent_Identity=31.2925170068027, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 17473; Mature: 17342

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPQLLGTCCGIGYFRPAPGTWGSLAALPLTYVLHVTGGFPLLAVFTVASVLVGLWAAK
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EMTRGQEDLDPSEFVLDELAGQMLALWAISLPAWLHGLEITALWPGWVAGFLLFRLFDIW
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHC
KPGPVGWADRKKGPFGVVMDDVIAGGMAAVGVAMLAGLSHGVLGL
CCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TLPQLLGTCCGIGYFRPAPGTWGSLAALPLTYVLHVTGGFPLLAVFTVASVLVGLWAAK
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EMTRGQEDLDPSEFVLDELAGQMLALWAISLPAWLHGLEITALWPGWVAGFLLFRLFDIW
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHC
KPGPVGWADRKKGPFGVVMDDVIAGGMAAVGVAMLAGLSHGVLGL
CCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]