| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081174
Identifier: 99081174
GI number: 99081174
Start: 1420988
End: 1421338
Strand: Direct
Name: 99081174
Synonym: TM1040_1333
Alternate gene names: NA
Gene position: 1420988-1421338 (Clockwise)
Preceding gene: 99081173
Following gene: 99081178
Centisome position: 44.39
GC content: 52.99
Gene sequence:
>351_bases ATGAATCTCTACCATTGTCAGATTGACCTCCAACACGAAGCTAAGGCTTTGGCCTTTGCCAGCGCAGTGGAGCAATGGAT GGAATATCTGAAAAGTCGCGGCGCGATCACCGGTTGGCGCCTACTTCGGCGCAAGCTGAACCTTGCAAACGATACCTGCA AGGATTTCCTGCTGGAGATCGAGTTTGAGAATATGACTCAGCTCGATCAGGCGTTTCGAATTCTGGGTGAACACGACGAG GAGGTCGCGCGCCTCTATGCAAACGTCAACGTTCTTATCGCGAGATCCGATTTTGGCCTCTATCGACCTTTCCCCGATCC CGAACGCGCGGAGCGGATGGCGTTGATCTAA
Upstream 100 bases:
>100_bases CGCTCCAGATTTGGGGCGGCGTTTTTCGTTTACGCTTCGCTCATGTTTTGGGCGCAAACTTGACCGTGATTTCCGCGTAT TGAGTCGGGAGAAGCGGCGC
Downstream 100 bases:
>100_bases AAAAAGCCCGGGACATATTGCCCGGGCTTTGATCTTTCTCCGACGTCACCTGTGTCAAAGATCATAGATCTCTGAGAATT TTGCTTCGAGGTAGTGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEIEFENMTQLDQAFRILGEHDE EVARLYANVNVLIARSDFGLYRPFPDPERAERMALI
Sequences:
>Translated_116_residues MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEIEFENMTQLDQAFRILGEHDE EVARLYANVNVLIARSDFGLYRPFPDPERAERMALI >Mature_116_residues MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEIEFENMTQLDQAFRILGEHDE EVARLYANVNVLIARSDFGLYRPFPDPERAERMALI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13589; Mature: 13589
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEI CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHC EFENMTQLDQAFRILGEHDEEVARLYANVNVLIARSDFGLYRPFPDPERAERMALI CCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEI CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHC EFENMTQLDQAFRILGEHDEEVARLYANVNVLIARSDFGLYRPFPDPERAERMALI CCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA