Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081174

Identifier: 99081174

GI number: 99081174

Start: 1420988

End: 1421338

Strand: Direct

Name: 99081174

Synonym: TM1040_1333

Alternate gene names: NA

Gene position: 1420988-1421338 (Clockwise)

Preceding gene: 99081173

Following gene: 99081178

Centisome position: 44.39

GC content: 52.99

Gene sequence:

>351_bases
ATGAATCTCTACCATTGTCAGATTGACCTCCAACACGAAGCTAAGGCTTTGGCCTTTGCCAGCGCAGTGGAGCAATGGAT
GGAATATCTGAAAAGTCGCGGCGCGATCACCGGTTGGCGCCTACTTCGGCGCAAGCTGAACCTTGCAAACGATACCTGCA
AGGATTTCCTGCTGGAGATCGAGTTTGAGAATATGACTCAGCTCGATCAGGCGTTTCGAATTCTGGGTGAACACGACGAG
GAGGTCGCGCGCCTCTATGCAAACGTCAACGTTCTTATCGCGAGATCCGATTTTGGCCTCTATCGACCTTTCCCCGATCC
CGAACGCGCGGAGCGGATGGCGTTGATCTAA

Upstream 100 bases:

>100_bases
CGCTCCAGATTTGGGGCGGCGTTTTTCGTTTACGCTTCGCTCATGTTTTGGGCGCAAACTTGACCGTGATTTCCGCGTAT
TGAGTCGGGAGAAGCGGCGC

Downstream 100 bases:

>100_bases
AAAAAGCCCGGGACATATTGCCCGGGCTTTGATCTTTCTCCGACGTCACCTGTGTCAAAGATCATAGATCTCTGAGAATT
TTGCTTCGAGGTAGTGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEIEFENMTQLDQAFRILGEHDE
EVARLYANVNVLIARSDFGLYRPFPDPERAERMALI

Sequences:

>Translated_116_residues
MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEIEFENMTQLDQAFRILGEHDE
EVARLYANVNVLIARSDFGLYRPFPDPERAERMALI
>Mature_116_residues
MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEIEFENMTQLDQAFRILGEHDE
EVARLYANVNVLIARSDFGLYRPFPDPERAERMALI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13589; Mature: 13589

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEI
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHC
EFENMTQLDQAFRILGEHDEEVARLYANVNVLIARSDFGLYRPFPDPERAERMALI
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MNLYHCQIDLQHEAKALAFASAVEQWMEYLKSRGAITGWRLLRRKLNLANDTCKDFLLEI
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHC
EFENMTQLDQAFRILGEHDEEVARLYANVNVLIARSDFGLYRPFPDPERAERMALI
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA