| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081164
Identifier: 99081164
GI number: 99081164
Start: 1409154
End: 1409492
Strand: Reverse
Name: 99081164
Synonym: TM1040_1323
Alternate gene names: NA
Gene position: 1409492-1409154 (Counterclockwise)
Preceding gene: 99081165
Following gene: 99081163
Centisome position: 44.03
GC content: 53.1
Gene sequence:
>339_bases ATGACCAGACCAACCCAACTTGAACCAAACGTGATCACTGAACAGGGCCTACGCGAGCTTGCTGAGAAGGGGCATGGGGT CGAAGTGTTGTGTCAGACCGTCCCGGAACGCAAAGGACCAAGCTGGTATGGCCGTTGGATTATGCGGACTATAGGGGCTG ACGGTAAGGAAAAGCTCCTTGTAACTGCAAGGACTCGCTTGACGCAGAATTCGATCAAGGTGCGAGAGTTCAAAACAGCG ACAGGTGTGATTTCCTTCTTGATTGGCATTGGGTTCGATCACGCAGACATCCCGCTCCGAGAAGGTGAAACGACCCTGCA CAAGCTACTCAACGGCTAG
Upstream 100 bases:
>100_bases GCGAGGATATATTCGGAGAGACAAAACCAATTATATACTATTGATAACTGGGGTACATTCTAGCATAGGGATGTAAGTCC CGTTATGTGAAGATCATCCG
Downstream 100 bases:
>100_bases TGGCTGTGATCCGGTCCCCGGTCGATGTCGCGATCCTTCTCGACCTCCTATTCGCGCTCGCCTTCGATATCCATCGAATG GCGCATTTCAAAACCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTRPTQLEPNVITEQGLRELAEKGHGVEVLCQTVPERKGPSWYGRWIMRTIGADGKEKLLVTARTRLTQNSIKVREFKTA TGVISFLIGIGFDHADIPLREGETTLHKLLNG
Sequences:
>Translated_112_residues MTRPTQLEPNVITEQGLRELAEKGHGVEVLCQTVPERKGPSWYGRWIMRTIGADGKEKLLVTARTRLTQNSIKVREFKTA TGVISFLIGIGFDHADIPLREGETTLHKLLNG >Mature_111_residues TRPTQLEPNVITEQGLRELAEKGHGVEVLCQTVPERKGPSWYGRWIMRTIGADGKEKLLVTARTRLTQNSIKVREFKTAT GVISFLIGIGFDHADIPLREGETTLHKLLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12524; Mature: 12392
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPTQLEPNVITEQGLRELAEKGHGVEVLCQTVPERKGPSWYGRWIMRTIGADGKEKLL CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEE VTARTRLTQNSIKVREFKTATGVISFLIGIGFDHADIPLREGETTLHKLLNG EHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TRPTQLEPNVITEQGLRELAEKGHGVEVLCQTVPERKGPSWYGRWIMRTIGADGKEKLL CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEE VTARTRLTQNSIKVREFKTATGVISFLIGIGFDHADIPLREGETTLHKLLNG EHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA