| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is gpt [H]
Identifier: 99080987
GI number: 99080987
Start: 1234272
End: 1234802
Strand: Reverse
Name: gpt [H]
Synonym: TM1040_1146
Alternate gene names: 99080987
Gene position: 1234802-1234272 (Counterclockwise)
Preceding gene: 99080988
Following gene: 99080986
Centisome position: 38.58
GC content: 63.09
Gene sequence:
>531_bases ATGAGCACCAAGGATCCGAACCGCCTGCCCCACGAGAAGGGGTTTCACATCTCCTGGGATCAAATCCACCGAGACAGCCG CGCGCTGGCGTGGCGTCTGGACGGGCTTGGCCCCGACGATGGCCATTGGCGCGCCGTGGTGGCGATCACCCGCGGGGGCA TGGCGCCCGCAATGATCGTCGCGCGCGAGCTGGATATCCGCACGGTGGATACCATCAGCGTGAAATCCTACCACTCCGGC GGCGGCAAGGCTGATCAGCGTCGCGAGGCCGAGGTGCTCAAGAGCCCCGACGCGGACATCATGGGCGATGGGACCGGCAT CCTGATCGTGGATGATCTGGTCGACTCCGGCAAAACGCTGGAACTGGTGCGCACCCTCTATCCCAAGGCGCATTTTGCCA CCGTCTACGCCAAGCCCCAGGGTGAGCCGCAGGTCGATACCTTTATCACGGGCGTGAGCCAGGACACCTGGATCTTTTTC CCGTGGGATATGGCGTTGCAGTATGTCGAACCTTACCGGGGTACGGATTGA
Upstream 100 bases:
>100_bases CTCCGGTGTGACCGGCGAGAACCTGCATGTGGATGCGGGTTATCATGTGGTCGGCATGAAGGCCGTGGACGCCCCCGATA TCGAGAAAGGCTAACCCCTG
Downstream 100 bases:
>100_bases CCCAGCGTCAATTTAGAAAATGACAAAACGCGCCCCTGTTGGCGCGTTTTCTTTTTTGGCTTTGTTTTCCATCTCTTGTC TTGAGATTTGAAAAGCGGCC
Product: xanthine-guanine phosphoribosyltransferase
Products: NA
Alternate protein names: Xanthine-guanine phosphoribosyltransferase; XGPRT [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSTKDPNRLPHEKGFHISWDQIHRDSRALAWRLDGLGPDDGHWRAVVAITRGGMAPAMIVARELDIRTVDTISVKSYHSG GGKADQRREAEVLKSPDADIMGDGTGILIVDDLVDSGKTLELVRTLYPKAHFATVYAKPQGEPQVDTFITGVSQDTWIFF PWDMALQYVEPYRGTD
Sequences:
>Translated_176_residues MSTKDPNRLPHEKGFHISWDQIHRDSRALAWRLDGLGPDDGHWRAVVAITRGGMAPAMIVARELDIRTVDTISVKSYHSG GGKADQRREAEVLKSPDADIMGDGTGILIVDDLVDSGKTLELVRTLYPKAHFATVYAKPQGEPQVDTFITGVSQDTWIFF PWDMALQYVEPYRGTD >Mature_175_residues STKDPNRLPHEKGFHISWDQIHRDSRALAWRLDGLGPDDGHWRAVVAITRGGMAPAMIVARELDIRTVDTISVKSYHSGG GKADQRREAEVLKSPDADIMGDGTGILIVDDLVDSGKTLELVRTLYPKAHFATVYAKPQGEPQVDTFITGVSQDTWIFFP WDMALQYVEPYRGTD
Specific function: Acts on guanine, xanthine and to a lesser extent hypoxanthine [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786433, Length=160, Percent_Identity=43.125, Blast_Score=138, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 19620; Mature: 19489
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKDPNRLPHEKGFHISWDQIHRDSRALAWRLDGLGPDDGHWRAVVAITRGGMAPAMIV CCCCCCCCCCCCCCCEEEHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEE ARELDIRTVDTISVKSYHSGGGKADQRREAEVLKSPDADIMGDGTGILIVDDLVDSGKTL EEECCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCHH ELVRTLYPKAHFATVYAKPQGEPQVDTFITGVSQDTWIFFPWDMALQYVEPYRGTD HHHHHHCCCCEEEEEEECCCCCCCHHHEEECCCCCCEEEEEHHHHHHHHCCCCCCC >Mature Secondary Structure STKDPNRLPHEKGFHISWDQIHRDSRALAWRLDGLGPDDGHWRAVVAITRGGMAPAMIV CCCCCCCCCCCCCCEEEHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEE ARELDIRTVDTISVKSYHSGGGKADQRREAEVLKSPDADIMGDGTGILIVDDLVDSGKTL EEECCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCHH ELVRTLYPKAHFATVYAKPQGEPQVDTFITGVSQDTWIFFPWDMALQYVEPYRGTD HHHHHHCCCCEEEEEEECCCCCCCHHHEEECCCCCCEEEEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA