Click here to switch to the map view.

The map label for this gene is yciA [C]

Identifier: 99080699

GI number: 99080699

Start: 910897

End: 911307

Strand: Direct

Name: yciA [C]

Synonym: TM1040_0858

Alternate gene names: 99080699

Gene position: 910897-911307 (Clockwise)

Preceding gene: 99080697

Following gene: 161899030

Centisome position: 28.46

GC content: 62.53

Gene sequence:

>411_bases
ATGTCCACATCTCAACCAGATACTGCCCCGCAAAATCCGCCCGAGACCCAACCGACAATCCGCGTCATCGCGATGCCCAC
GGACACCAACCCGGCGGGTGATATCTTTGGTGGCTGGCTCATGAGCCAGATGGATCTTGCGGCAGGCACCATCGCGGCAA
GGGTATCCAAGGGGCGGGCTTCAACCGTCTCGGTCGAGGAGATTCAGTTTCATCGCCCCGTTCTGGTGGGCGACGAGGTC
TCGCTATATGCGGAGATGCTGAAAATCGGGCGCACCTCGATGCGCATCCGTGTGCGCGCCTGGCGTCGCGCCCGCCATCA
GGAAGAAACCCAGCAGGTGACAGAAGCGATCTTCACCTTCGTGGCGCTGGACGACCATGCGCGGCCGAGGCCGGTGCTGC
GCGAGGCGTAA

Upstream 100 bases:

>100_bases
GAGAGCGCCGTGAACCGGTTTTGTCTTTCCCCATGTACGGTCTGGCGGCACAGTGACCTAAGCCCCCTGTGATCCTTCCC
GAACAGACGAGAGTCCGCCG

Downstream 100 bases:

>100_bases
AACGACACAGCCCCCGCAGAGGCTGCGAGGGCTGGTCTGATCGTTTCGGGGAGAGGGCAGGGCGCCACTGCGCCCTGAGC
CCCTCAGGCTTTGCTCAGGG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSTSQPDTAPQNPPETQPTIRVIAMPTDTNPAGDIFGGWLMSQMDLAAGTIAARVSKGRASTVSVEEIQFHRPVLVGDEV
SLYAEMLKIGRTSMRIRVRAWRRARHQEETQQVTEAIFTFVALDDHARPRPVLREA

Sequences:

>Translated_136_residues
MSTSQPDTAPQNPPETQPTIRVIAMPTDTNPAGDIFGGWLMSQMDLAAGTIAARVSKGRASTVSVEEIQFHRPVLVGDEV
SLYAEMLKIGRTSMRIRVRAWRRARHQEETQQVTEAIFTFVALDDHARPRPVLREA
>Mature_135_residues
STSQPDTAPQNPPETQPTIRVIAMPTDTNPAGDIFGGWLMSQMDLAAGTIAARVSKGRASTVSVEEIQFHRPVLVGDEVS
LYAEMLKIGRTSMRIRVRAWRRARHQEETQQVTEAIFTFVALDDHARPRPVLREA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=123, Percent_Identity=44.7154471544715, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 15139; Mature: 15008

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSQPDTAPQNPPETQPTIRVIAMPTDTNPAGDIFGGWLMSQMDLAAGTIAARVSKGRA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
STVSVEEIQFHRPVLVGDEVSLYAEMLKIGRTSMRIRVRAWRRARHQEETQQVTEAIFTF
CEEEHHHHHCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALDDHARPRPVLREA
HHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STSQPDTAPQNPPETQPTIRVIAMPTDTNPAGDIFGGWLMSQMDLAAGTIAARVSKGRA
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
STVSVEEIQFHRPVLVGDEVSLYAEMLKIGRTSMRIRVRAWRRARHQEETQQVTEAIFTF
CEEEHHHHHCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALDDHARPRPVLREA
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9515924 [H]