| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080668
Identifier: 99080668
GI number: 99080668
Start: 868803
End: 869201
Strand: Direct
Name: 99080668
Synonym: TM1040_0827
Alternate gene names: NA
Gene position: 868803-869201 (Clockwise)
Preceding gene: 99080667
Following gene: 99080673
Centisome position: 27.14
GC content: 58.9
Gene sequence:
>399_bases ATGACCGGCTTGATCGCATTCCTCATGCGCATGGGTTTCGGTGGAATGGTGGACAAAGCCATCAGCCACTTGGAGCGCCG CGCAGAGCTTCAAAACGACCGCGAGAAGCTCAGGAGCCAAACGACTGTAGAGCTGGCCCGTGAGGCCGTGAAAGAAGCCC AGATCATGGCCGACTACAATCGCGCCAAGTTCGCCTTTCCGTGGTTCTGGCTGTTCGCTGCGCTCTTCCTCGTACCCTTG GCCGCATGGTGGAGCGCAGTCATTCTCGACAGCATCTTCGGCTTCACCTGGTCTGTCGCAGATCTGCCAACCCCGCAGAT GCAGGAGTGGGCCGGGGATATGATCCGCTGGCTATTCTATGTCGGCACAGGTGTCGGAGCGATCAAGTCGCTTCGGTGA
Upstream 100 bases:
>100_bases CACAGCTTCAAGGCCCTGTTGCCTACGCCTTGGCCGCTGTGCTTCTGATTGCTGCTGTGACCGCCGCTCTGTACTTCCTG CGATCGCAGGAGGCTGAGGC
Downstream 100 bases:
>100_bases AGCTGGCATAACCTCAAAGACGAAAGCCCCGGTGACTGCCGGGGCTTTTTCGTTTCTTGATCCGCTCTTGATTGTGCGCT GATGCACTATTCGGATCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKFAFPWFWLFAALFLVPL AAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGAIKSLR
Sequences:
>Translated_132_residues MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKFAFPWFWLFAALFLVPL AAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGAIKSLR >Mature_131_residues TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKFAFPWFWLFAALFLVPLA AWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGAIKSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15094; Mature: 14963
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYN CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RAKFAFPWFWLFAALFLVPLAAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VGTGVGAIKSLR HHCCHHHHHCCC >Mature Secondary Structure TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RAKFAFPWFWLFAALFLVPLAAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VGTGVGAIKSLR HHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA