Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080668

Identifier: 99080668

GI number: 99080668

Start: 868803

End: 869201

Strand: Direct

Name: 99080668

Synonym: TM1040_0827

Alternate gene names: NA

Gene position: 868803-869201 (Clockwise)

Preceding gene: 99080667

Following gene: 99080673

Centisome position: 27.14

GC content: 58.9

Gene sequence:

>399_bases
ATGACCGGCTTGATCGCATTCCTCATGCGCATGGGTTTCGGTGGAATGGTGGACAAAGCCATCAGCCACTTGGAGCGCCG
CGCAGAGCTTCAAAACGACCGCGAGAAGCTCAGGAGCCAAACGACTGTAGAGCTGGCCCGTGAGGCCGTGAAAGAAGCCC
AGATCATGGCCGACTACAATCGCGCCAAGTTCGCCTTTCCGTGGTTCTGGCTGTTCGCTGCGCTCTTCCTCGTACCCTTG
GCCGCATGGTGGAGCGCAGTCATTCTCGACAGCATCTTCGGCTTCACCTGGTCTGTCGCAGATCTGCCAACCCCGCAGAT
GCAGGAGTGGGCCGGGGATATGATCCGCTGGCTATTCTATGTCGGCACAGGTGTCGGAGCGATCAAGTCGCTTCGGTGA

Upstream 100 bases:

>100_bases
CACAGCTTCAAGGCCCTGTTGCCTACGCCTTGGCCGCTGTGCTTCTGATTGCTGCTGTGACCGCCGCTCTGTACTTCCTG
CGATCGCAGGAGGCTGAGGC

Downstream 100 bases:

>100_bases
AGCTGGCATAACCTCAAAGACGAAAGCCCCGGTGACTGCCGGGGCTTTTTCGTTTCTTGATCCGCTCTTGATTGTGCGCT
GATGCACTATTCGGATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKFAFPWFWLFAALFLVPL
AAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGAIKSLR

Sequences:

>Translated_132_residues
MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKFAFPWFWLFAALFLVPL
AAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGAIKSLR
>Mature_131_residues
TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKFAFPWFWLFAALFLVPLA
AWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGAIKSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15094; Mature: 14963

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYN
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RAKFAFPWFWLFAALFLVPLAAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VGTGVGAIKSLR
HHCCHHHHHCCC
>Mature Secondary Structure 
TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RAKFAFPWFWLFAALFLVPLAAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VGTGVGAIKSLR
HHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA