| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080653
Identifier: 99080653
GI number: 99080653
Start: 856572
End: 857060
Strand: Direct
Name: 99080653
Synonym: TM1040_0812
Alternate gene names: NA
Gene position: 856572-857060 (Clockwise)
Preceding gene: 99080652
Following gene: 99080654
Centisome position: 26.76
GC content: 59.51
Gene sequence:
>489_bases ATGACTCAGAACCATATCGGCGATACCATCTACGTCGCCAAAGCATATCCGGCCACTAATGACGCGGCTGGCTTCGAGGC CCTGGTTTGGGTGCAGGCAAAAGGCAATGTGACCCTGCCGCAGCTTGGCGTTTCCCACAGCATGATTGACATTCCGGATC TTGCCACGGGGTTTACTGATGCGGTGAAAGGCGCGGGGCAGGGCGTCGATACGACTATGACTTTCCGCGACGTGGACGGC GATACCGGGCAGGCGGACGTGATCGCACAGGCAGACGACAACGACGGCATTCTCTGCGTGAAAATTGTCTCCGGCACTGG CGCGGATACCGGCGATGGGCCGGCCCCGGTCGCAGGTGATGTCGTGAAGTACGCGCAGGGTATCGCTCACAGCCACCAAC CCAACCAAGGCGACAGTTCTTCCTACAAGGGCTTCCAGGTCGGTTTCCGCCAGAAGAAGCCCACTGTTGTAGCCACCCAG CCCATCTAA
Upstream 100 bases:
>100_bases GAACGCCGAGTAACCCACCGCCCGAGGGTCTAACCGGGCATTCCCCACAATCTGAATAGAGAGCCCCGTAAGCGGGTTCT TTTCGCATGGAGAACTGACG
Downstream 100 bases:
>100_bases TCCCGGCCGGGATAGGGGCGGGAAGCGTTCGTGGTCGCGCCCGCCCCACACCATGCAACCACGACACCACCCAAACAGTC ATATAACCACGGAGATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTQNHIGDTIYVAKAYPATNDAAGFEALVWVQAKGNVTLPQLGVSHSMIDIPDLATGFTDAVKGAGQGVDTTMTFRDVDG DTGQADVIAQADDNDGILCVKIVSGTGADTGDGPAPVAGDVVKYAQGIAHSHQPNQGDSSSYKGFQVGFRQKKPTVVATQ PI
Sequences:
>Translated_162_residues MTQNHIGDTIYVAKAYPATNDAAGFEALVWVQAKGNVTLPQLGVSHSMIDIPDLATGFTDAVKGAGQGVDTTMTFRDVDG DTGQADVIAQADDNDGILCVKIVSGTGADTGDGPAPVAGDVVKYAQGIAHSHQPNQGDSSSYKGFQVGFRQKKPTVVATQ PI >Mature_161_residues TQNHIGDTIYVAKAYPATNDAAGFEALVWVQAKGNVTLPQLGVSHSMIDIPDLATGFTDAVKGAGQGVDTTMTFRDVDGD TGQADVIAQADDNDGILCVKIVSGTGADTGDGPAPVAGDVVKYAQGIAHSHQPNQGDSSSYKGFQVGFRQKKPTVVATQP I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16733; Mature: 16601
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNHIGDTIYVAKAYPATNDAAGFEALVWVQAKGNVTLPQLGVSHSMIDIPDLATGFTD CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCEEECCCCCCCHHH AVKGAGQGVDTTMTFRDVDGDTGQADVIAQADDNDGILCVKIVSGTGADTGDGPAPVAGD HHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHH VVKYAQGIAHSHQPNQGDSSSYKGFQVGFRQKKPTVVATQPI HHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCC >Mature Secondary Structure TQNHIGDTIYVAKAYPATNDAAGFEALVWVQAKGNVTLPQLGVSHSMIDIPDLATGFTD CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCEEECCCCCCCHHH AVKGAGQGVDTTMTFRDVDGDTGQADVIAQADDNDGILCVKIVSGTGADTGDGPAPVAGD HHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHH VVKYAQGIAHSHQPNQGDSSSYKGFQVGFRQKKPTVVATQPI HHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA