Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080647

Identifier: 99080647

GI number: 99080647

Start: 853963

End: 854214

Strand: Direct

Name: 99080647

Synonym: TM1040_0806

Alternate gene names: NA

Gene position: 853963-854214 (Clockwise)

Preceding gene: 99080646

Following gene: 99080648

Centisome position: 26.68

GC content: 52.38

Gene sequence:

>252_bases
ATGAAAATCGCATACGAAAAGCATCCGGTTTCGAAGGAGCGCAAAGCAGAGTTGCGCGGCAAGGGCTTCAAGATCATCGA
CGCTCGCTTCGACCCTGATCGCAAAGATGAGGATGTTTCCACCAAGAATATCGCTGAAATGGAGCGCGATGATGTGATTG
CGCTGCTCAAAAAGAACGGCGTCGATGATCCGAAAGGCAAGATTGCTGACCTACGCAACCGCCTGACCGCAATCCTGTTC
CCGGAAGCCTGA

Upstream 100 bases:

>100_bases
CGCAGGCGTAATCGCCGTGGCCGACGCTGACCAATAAAGGCGGCTTTTTGAGGGGCTGGGAAATCCGGCCCCTTTTTCAA
GCCACCAAGGAGAACAACCC

Downstream 100 bases:

>100_bases
CATGACCTTGACCGTCGAGGATGGCAACGGCCTTGCTGCGGCTGACAGCTACGTCACGCTGGCCGCATATCAGGCATATG
GTGCGGCCCGCGGCTGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MKIAYEKHPVSKERKAELRGKGFKIIDARFDPDRKDEDVSTKNIAEMERDDVIALLKKNGVDDPKGKIADLRNRLTAILF
PEA

Sequences:

>Translated_83_residues
MKIAYEKHPVSKERKAELRGKGFKIIDARFDPDRKDEDVSTKNIAEMERDDVIALLKKNGVDDPKGKIADLRNRLTAILF
PEA
>Mature_83_residues
MKIAYEKHPVSKERKAELRGKGFKIIDARFDPDRKDEDVSTKNIAEMERDDVIALLKKNGVDDPKGKIADLRNRLTAILF
PEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9480; Mature: 9480

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAYEKHPVSKERKAELRGKGFKIIDARFDPDRKDEDVSTKNIAEMERDDVIALLKKNG
CCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCC
VDDPKGKIADLRNRLTAILFPEA
CCCCCCHHHHHHCCEEEEECCCC
>Mature Secondary Structure
MKIAYEKHPVSKERKAELRGKGFKIIDARFDPDRKDEDVSTKNIAEMERDDVIALLKKNG
CCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCC
VDDPKGKIADLRNRLTAILFPEA
CCCCCCHHHHHHCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA