Click here to switch to the map view.

The map label for this gene is nuoJ [H]

Identifier: 99080597

GI number: 99080597

Start: 811121

End: 811723

Strand: Direct

Name: nuoJ [H]

Synonym: TM1040_0756

Alternate gene names: 99080597

Gene position: 811121-811723 (Clockwise)

Preceding gene: 99080596

Following gene: 99080598

Centisome position: 25.34

GC content: 58.87

Gene sequence:

>603_bases
ATGAGCGTTTTTGCCTTTTACCTCTTCGCCATCAGCGCCATCACCGGCGGGCTGTTCACAGTGATCAGCCGCCAGCCGGT
GCACTCGGTGCTGTGGCTCATTTTGGCATTTCTTTCTTCTGCCGGGTTGTTCGTGCTTTTGGGGGCGGAGTTCGTCGCCA
TGTTGCTCGTCATCGTTTATGTGGGCGCGGTCGCGGTGCTGTTCCTCTTTGTGGTGATGATGCTCGACGTGGACTTTGCC
GAGCTCAAGGCCGAGATGGCCCGCTACACGCCGCTGGCCCTGTTGATCGGGCTGGTGATCCTGATGCAGTTCGTGATCGC
CTATGGGTCCTGGGAGAGCGCGCATAGCGTTGCCGAGAACCTGAGCCAGCCGATCCCAACGGACCGTCACAACACCGAGG
CGCTTGGCCTCATTCTTTATGACCAATATTTCCTTCTGTTCCAGCTGGCGGGTCTGATCCTTCTGGTGGCCATGATCGGT
GCCATCGTTCTGACCCTGCGCCACCGCCAGGATGTGAAGCGTCAGGACGTGCTCGCCCAGATGTATCGCGATCCGGCCAA
GGCAATGGAGCTCAAGGACATCAAACCGGGCCAAGGGCTTTGA

Upstream 100 bases:

>100_bases
AAACGATCGGACAGATGTCGGTCTTTGCCGGCATTCCGGCCATGACCCGCGCAATGGATTTGGCGCAGGAGGTCATGGAC
GACAAAGGGGACGATGAGAC

Downstream 100 bases:

>100_bases
AGGGGCTTTGATCAATGATCGGAATTGAACATTATCTGACCGTCGCGGCGACCTTGTTCGTCATCGGCATCTTCGGGCTT
TTTCTGAACCGCAAGAACGT

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVYVGAVAVLFLFVVMMLDVDFA
ELKAEMARYTPLALLIGLVILMQFVIAYGSWESAHSVAENLSQPIPTDRHNTEALGLILYDQYFLLFQLAGLILLVAMIG
AIVLTLRHRQDVKRQDVLAQMYRDPAKAMELKDIKPGQGL

Sequences:

>Translated_200_residues
MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVYVGAVAVLFLFVVMMLDVDFA
ELKAEMARYTPLALLIGLVILMQFVIAYGSWESAHSVAENLSQPIPTDRHNTEALGLILYDQYFLLFQLAGLILLVAMIG
AIVLTLRHRQDVKRQDVLAQMYRDPAKAMELKDIKPGQGL
>Mature_199_residues
SVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVYVGAVAVLFLFVVMMLDVDFAE
LKAEMARYTPLALLIGLVILMQFVIAYGSWESAHSVAENLSQPIPTDRHNTEALGLILYDQYFLLFQLAGLILLVAMIGA
IVLTLRHRQDVKRQDVLAQMYRDPAKAMELKDIKPGQGL

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=187, Percent_Identity=33.6898395721925, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 22122; Mature: 21991

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVY
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGAVAVLFLFVVMMLDVDFAELKAEMARYTPLALLIGLVILMQFVIAYGSWESAHSVAEN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LSQPIPTDRHNTEALGLILYDQYFLLFQLAGLILLVAMIGAIVLTLRHRQDVKRQDVLAQ
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MYRDPAKAMELKDIKPGQGL
HHHCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGAVAVLFLFVVMMLDVDFAELKAEMARYTPLALLIGLVILMQFVIAYGSWESAHSVAEN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LSQPIPTDRHNTEALGLILYDQYFLLFQLAGLILLVAMIGAIVLTLRHRQDVKRQDVLAQ
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MYRDPAKAMELKDIKPGQGL
HHHCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]