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The map label for this gene is xp55 [H]

Identifier: 99080556

GI number: 99080556

Start: 769931

End: 771628

Strand: Reverse

Name: xp55 [H]

Synonym: TM1040_0715

Alternate gene names: 99080556

Gene position: 771628-769931 (Counterclockwise)

Preceding gene: 99080561

Following gene: 99080555

Centisome position: 24.11

GC content: 60.54

Gene sequence:

>1698_bases
ATGACATTGAAATCCCTTCTGCTGGGTGCTGTGGCAACTGCCGCTGTCGCCCCTGCGGCTTTTGCCGAGCGTGGCTCGGA
CGGCCAGGTCAACATTATTTATTGGCAGGCTCCGTCCATCATGAACCCGTTCCTGTCCGGCGGCACCAAGGACGTTGAAG
CGGCCTCGCTCGTGATCGAGCCTCTGGCGCGCTACAACTCCTCCGGCGAGATGGTTCCGTGGCTGGTCGAAGAAGTCCCC
ACCGTTGAAAACGGCGGCGTGAGCGAAGACCTGACCCAGATCACCTGGAAACTGAAGCCGGGCATCAAGTGGTCCGATGG
TTCCGACCTTACGTCTGCGGACGTGAAGTTCACATATGAGTACTGCACCCACCCCGAGGGCGGCTGCGCACAGGTCACCA
AGTTCGAAGGCGTTACCTCTGTCGAGACCCCCGACGACTCCACCGTGGTGGTGACCTTCGATAAAGCGACCCCCTTCCCC
TATGGCCCCTTCGTCGGCGGTGAAAGCCCGATCATTCAGGCAGCACAGTTCGCTGAGTGCCTTGGTGCCAAAGCACCTGA
GTGTACCGAAGCCAACTTCAACCCGATCGGCACCGGCCCGTTTGTGGTCGACGAGTTCAAGCCGAACGACGTGATCACCC
TCTCCGCGAACCCGAACTACCGTGACCCGGCCAAGCCCGCGTTCGCGAAGGTTCTGTTCAAAGGTGGCGGCGATGCAACC
GCAGCCGGTCGCGCCGTGATGGAAACCGGCGAATTCGACTACGCATGGAACCTCCAGCTGGCCCCCGATGTCATCGCGCA
GATGGAAGCAGGCGGCAAAGGCCAAGCGGTTGCAGGCTTTGGTCCGCTCCTCGAGCGCATCATGCTCAACAACACCAACC
CCTCCGCGGATCTCTCCCCGGAAGAGCGTTCGGTGATCCGTCCGCACCCGTTCCTGTCCGATCCGGCGGTTTACAAAGCC
ATGTCCATGGCAATCGACCGTCCGCTTCTGGTGGAAATCGGCTATGGCAAAGCAGGTCGCGTGTCCTGCTCCTGGGTTCC
GGCCCCCGAAGCCTTTGCGATCAGCCCCGAAGGCTGTGAGACTCAGGACATCGCCGGTGCAAACGCCATGCTCGACGCAG
CAGGTATCGTTGACACCGATGGTGACGGCATCCGCGAAAAAGACGGTGTTCCGCTGAAGATCCTGTACCAGACCTCGACC
AACGCCGTCCGTCAGGACTTCCAGGCGCTGATCAAACAGTGGTGGAGCGAGATCGGCATCGAAACCGAACTGCGTAACAT
CAACTCCTCCGTGTTCTTCGGCGGCGACCCGGGCTCCCCGGACACCTTCCAGAAGTTCTACGCAGACGTTGAAATGTACG
CCAACACCTTCAACGGCACTGACCCGCAGTCCTACTTCGGCAACGGTCTGTGCGACAAAGCCCCGACTCCGGCCTCCCAG
TGGCAGGGTGAGAACATCTCCCGCTTCTGTGACGAAGAGTTCGACGCGCTGCACGCAGAGCTTTCGCAAACCGCAGACAT
GGCAAAACGGATCGAGATCGGTCAGCAGCTCAACACCATCATCTTTGAGCGTGGTGGGATGATCCCGCTGGTCCACCGTG
GCCGTCTGTCCGCACACTCCAACACCCTTGGTGGTGTCGACCTGAACGTGTGGGACAGCGAGCTGTGGAACGCAGCTGAC
TGGTACCGCTCCGAATAA

Upstream 100 bases:

>100_bases
AGACCCAGATCGTCTTCAGGCGATCGCGGGCTGCACAGATCAAAAAACGTGCAGTCCTAAACAACAATAACACTATGTCG
GTTCCGACAAGGAGAGTGTA

Downstream 100 bases:

>100_bases
GCGTCCGTCCGCACTCTAGAGGGCCCCGGCTTCACCGCCGGGGCCCACTGGTATTCGCGTTACCCAACTCTGAGAGGTTC
AGCATTGTTGTTACGCTGGA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MTLKSLLLGAVATAAVAPAAFAERGSDGQVNIIYWQAPSIMNPFLSGGTKDVEAASLVIEPLARYNSSGEMVPWLVEEVP
TVENGGVSEDLTQITWKLKPGIKWSDGSDLTSADVKFTYEYCTHPEGGCAQVTKFEGVTSVETPDDSTVVVTFDKATPFP
YGPFVGGESPIIQAAQFAECLGAKAPECTEANFNPIGTGPFVVDEFKPNDVITLSANPNYRDPAKPAFAKVLFKGGGDAT
AAGRAVMETGEFDYAWNLQLAPDVIAQMEAGGKGQAVAGFGPLLERIMLNNTNPSADLSPEERSVIRPHPFLSDPAVYKA
MSMAIDRPLLVEIGYGKAGRVSCSWVPAPEAFAISPEGCETQDIAGANAMLDAAGIVDTDGDGIREKDGVPLKILYQTST
NAVRQDFQALIKQWWSEIGIETELRNINSSVFFGGDPGSPDTFQKFYADVEMYANTFNGTDPQSYFGNGLCDKAPTPASQ
WQGENISRFCDEEFDALHAELSQTADMAKRIEIGQQLNTIIFERGGMIPLVHRGRLSAHSNTLGGVDLNVWDSELWNAAD
WYRSE

Sequences:

>Translated_565_residues
MTLKSLLLGAVATAAVAPAAFAERGSDGQVNIIYWQAPSIMNPFLSGGTKDVEAASLVIEPLARYNSSGEMVPWLVEEVP
TVENGGVSEDLTQITWKLKPGIKWSDGSDLTSADVKFTYEYCTHPEGGCAQVTKFEGVTSVETPDDSTVVVTFDKATPFP
YGPFVGGESPIIQAAQFAECLGAKAPECTEANFNPIGTGPFVVDEFKPNDVITLSANPNYRDPAKPAFAKVLFKGGGDAT
AAGRAVMETGEFDYAWNLQLAPDVIAQMEAGGKGQAVAGFGPLLERIMLNNTNPSADLSPEERSVIRPHPFLSDPAVYKA
MSMAIDRPLLVEIGYGKAGRVSCSWVPAPEAFAISPEGCETQDIAGANAMLDAAGIVDTDGDGIREKDGVPLKILYQTST
NAVRQDFQALIKQWWSEIGIETELRNINSSVFFGGDPGSPDTFQKFYADVEMYANTFNGTDPQSYFGNGLCDKAPTPASQ
WQGENISRFCDEEFDALHAELSQTADMAKRIEIGQQLNTIIFERGGMIPLVHRGRLSAHSNTLGGVDLNVWDSELWNAAD
WYRSE
>Mature_564_residues
TLKSLLLGAVATAAVAPAAFAERGSDGQVNIIYWQAPSIMNPFLSGGTKDVEAASLVIEPLARYNSSGEMVPWLVEEVPT
VENGGVSEDLTQITWKLKPGIKWSDGSDLTSADVKFTYEYCTHPEGGCAQVTKFEGVTSVETPDDSTVVVTFDKATPFPY
GPFVGGESPIIQAAQFAECLGAKAPECTEANFNPIGTGPFVVDEFKPNDVITLSANPNYRDPAKPAFAKVLFKGGGDATA
AGRAVMETGEFDYAWNLQLAPDVIAQMEAGGKGQAVAGFGPLLERIMLNNTNPSADLSPEERSVIRPHPFLSDPAVYKAM
SMAIDRPLLVEIGYGKAGRVSCSWVPAPEAFAISPEGCETQDIAGANAMLDAAGIVDTDGDGIREKDGVPLKILYQTSTN
AVRQDFQALIKQWWSEIGIETELRNINSSVFFGGDPGSPDTFQKFYADVEMYANTFNGTDPQSYFGNGLCDKAPTPASQW
QGENISRFCDEEFDALHAELSQTADMAKRIEIGQQLNTIIFERGGMIPLVHRGRLSAHSNTLGGVDLNVWDSELWNAADW
YRSE

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=470, Percent_Identity=22.7659574468085, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60892; Mature: 60760

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKSLLLGAVATAAVAPAAFAERGSDGQVNIIYWQAPSIMNPFLSGGTKDVEAASLVIE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCCHHHHHHHHH
PLARYNSSGEMVPWLVEEVPTVENGGVSEDLTQITWKLKPGIKWSDGSDLTSADVKFTYE
HHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHEEEEEECCCCEECCCCCCCCCCEEEEEE
YCTHPEGGCAQVTKFEGVTSVETPDDSTVVVTFDKATPFPYGPFVGGESPIIQAAQFAEC
ECCCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
LGAKAPECTEANFNPIGTGPFVVDEFKPNDVITLSANPNYRDPAKPAFAKVLFKGGGDAT
HCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHEECCCCCCC
AAGRAVMETGEFDYAWNLQLAPDVIAQMEAGGKGQAVAGFGPLLERIMLNNTNPSADLSP
HHCHHHHCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCC
EERSVIRPHPFLSDPAVYKAMSMAIDRPLLVEIGYGKAGRVSCSWVPAPEAFAISPEGCE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEECCCCCC
TQDIAGANAMLDAAGIVDTDGDGIREKDGVPLKILYQTSTNAVRQDFQALIKQWWSEIGI
CCCCCCCCHHEECCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC
ETELRNINSSVFFGGDPGSPDTFQKFYADVEMYANTFNGTDPQSYFGNGLCDKAPTPASQ
EEEHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHH
WQGENISRFCDEEFDALHAELSQTADMAKRIEIGQQLNTIIFERGGMIPLVHRGRLSAHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
NTLGGVDLNVWDSELWNAADWYRSE
CCCCCEEEEECHHHHCCCHHHHCCC
>Mature Secondary Structure 
TLKSLLLGAVATAAVAPAAFAERGSDGQVNIIYWQAPSIMNPFLSGGTKDVEAASLVIE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCCHHHHHHHHH
PLARYNSSGEMVPWLVEEVPTVENGGVSEDLTQITWKLKPGIKWSDGSDLTSADVKFTYE
HHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHEEEEEECCCCEECCCCCCCCCCEEEEEE
YCTHPEGGCAQVTKFEGVTSVETPDDSTVVVTFDKATPFPYGPFVGGESPIIQAAQFAEC
ECCCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
LGAKAPECTEANFNPIGTGPFVVDEFKPNDVITLSANPNYRDPAKPAFAKVLFKGGGDAT
HCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHEECCCCCCC
AAGRAVMETGEFDYAWNLQLAPDVIAQMEAGGKGQAVAGFGPLLERIMLNNTNPSADLSP
HHCHHHHCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCC
EERSVIRPHPFLSDPAVYKAMSMAIDRPLLVEIGYGKAGRVSCSWVPAPEAFAISPEGCE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEECCCCCC
TQDIAGANAMLDAAGIVDTDGDGIREKDGVPLKILYQTSTNAVRQDFQALIKQWWSEIGI
CCCCCCCCHHEECCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC
ETELRNINSSVFFGGDPGSPDTFQKFYADVEMYANTFNGTDPQSYFGNGLCDKAPTPASQ
EEEHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHH
WQGENISRFCDEEFDALHAELSQTADMAKRIEIGQQLNTIIFERGGMIPLVHRGRLSAHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
NTLGGVDLNVWDSELWNAADWYRSE
CCCCCEEEEECHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]