Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080535

Identifier: 99080535

GI number: 99080535

Start: 745727

End: 746419

Strand: Reverse

Name: 99080535

Synonym: TM1040_0694

Alternate gene names: NA

Gene position: 746419-745727 (Counterclockwise)

Preceding gene: 99080536

Following gene: 99080521

Centisome position: 23.32

GC content: 60.89

Gene sequence:

>693_bases
ATGATTTTCACCGCCTTTGGCAAAGCCCTTGGCCAGATTGGGGATCCGCGGTTTCAGCGGGTCCTCCTGCTTGGGGTGGG
GCTCACCTTTGCTCTGCTGGTCGCGGCATATGTCGGGCTTTTGGTCCTGATCCAGATGTTTGTGGGACCTGAGACCTCGC
TGCCGCTGATTGGTCAGGTTACGTGGCTCAACGACCTGCTGTCGGTGGGCTCCTTCTTCTTCATGATGCTGTTGTCGGTG
TTTCTGATGGTACCGGTAGCTTCGGCGATCACATCCATGTTTCTTGATGAGGTCGCCGCCGCCGTCGAAGCCAAACACTA
TCCAGGCCTGCCTCCGGTGCCGGGGCTGTCGGTCTGGGAGGGCGTAAAAGACACGGTGAATTTCCTCGGCGTGCTGATCA
CCGCCAACGTGCTGGCCTTGGTGCTTTATGTGATGTTCCCCCCTGCCGCGCCCTTTATCTTCTGGGGGCTCAATGGGTTC
TTGCTTGGGCGGGAGTATTTCACCCTCGCGGCCGCCCGTCGGGTCGGCTTGATCGAGGCCAAGCGCCTGCGCCGTCGCCA
TGGGGCGACGATCTGGGCGGCGGGCGTGCTGATGGCGATGCCCTTGTCGATCCCACTGGTGAACTTGCTGATCCCGATAC
TTGGCGCGGCAACCTTCACGCATATCTTCCACGCGCTCTGGCGCTGGCGCTGA

Upstream 100 bases:

>100_bases
ACGAGCGTATCGCCGGTCTCATCCATATTGCCGCCGAAGGCGCCGCGCCGCCGGAACGTCCGCGCCCCGATGTGACGGCG
CTTACCACATGGGTCGAGAC

Downstream 100 bases:

>100_bases
GCTTTGGCGCAGGGGAGCATTTGCGCCCCCGCCCCCATCAGGAATGCGGCACGAATAATCCCGGGACAAACGGAGCGCCC
ATCAGGCAGCGCAGCCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; CysZ Protein

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIFTAFGKALGQIGDPRFQRVLLLGVGLTFALLVAAYVGLLVLIQMFVGPETSLPLIGQVTWLNDLLSVGSFFFMMLLSV
FLMVPVASAITSMFLDEVAAAVEAKHYPGLPPVPGLSVWEGVKDTVNFLGVLITANVLALVLYVMFPPAAPFIFWGLNGF
LLGREYFTLAAARRVGLIEAKRLRRRHGATIWAAGVLMAMPLSIPLVNLLIPILGAATFTHIFHALWRWR

Sequences:

>Translated_230_residues
MIFTAFGKALGQIGDPRFQRVLLLGVGLTFALLVAAYVGLLVLIQMFVGPETSLPLIGQVTWLNDLLSVGSFFFMMLLSV
FLMVPVASAITSMFLDEVAAAVEAKHYPGLPPVPGLSVWEGVKDTVNFLGVLITANVLALVLYVMFPPAAPFIFWGLNGF
LLGREYFTLAAARRVGLIEAKRLRRRHGATIWAAGVLMAMPLSIPLVNLLIPILGAATFTHIFHALWRWR
>Mature_230_residues
MIFTAFGKALGQIGDPRFQRVLLLGVGLTFALLVAAYVGLLVLIQMFVGPETSLPLIGQVTWLNDLLSVGSFFFMMLLSV
FLMVPVASAITSMFLDEVAAAVEAKHYPGLPPVPGLSVWEGVKDTVNFLGVLITANVLALVLYVMFPPAAPFIFWGLNGF
LLGREYFTLAAARRVGLIEAKRLRRRHGATIWAAGVLMAMPLSIPLVNLLIPILGAATFTHIFHALWRWR

Specific function: Unknown

COG id: COG2981

COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25137; Mature: 25137

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTAFGKALGQIGDPRFQRVLLLGVGLTFALLVAAYVGLLVLIQMFVGPETSLPLIGQV
CEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
TWLNDLLSVGSFFFMMLLSVFLMVPVASAITSMFLDEVAAAVEAKHYPGLPPVPGLSVWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
GVKDTVNFLGVLITANVLALVLYVMFPPAAPFIFWGLNGFLLGREYFTLAAARRVGLIEA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KRLRRRHGATIWAAGVLMAMPLSIPLVNLLIPILGAATFTHIFHALWRWR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFTAFGKALGQIGDPRFQRVLLLGVGLTFALLVAAYVGLLVLIQMFVGPETSLPLIGQV
CEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
TWLNDLLSVGSFFFMMLLSVFLMVPVASAITSMFLDEVAAAVEAKHYPGLPPVPGLSVWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
GVKDTVNFLGVLITANVLALVLYVMFPPAAPFIFWGLNGFLLGREYFTLAAARRVGLIEA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KRLRRRHGATIWAAGVLMAMPLSIPLVNLLIPILGAATFTHIFHALWRWR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA