| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is argK [C]
Identifier: 99080511
GI number: 99080511
Start: 718401
End: 719402
Strand: Direct
Name: argK [C]
Synonym: TM1040_0670
Alternate gene names: 99080511
Gene position: 718401-719402 (Clockwise)
Preceding gene: 99080507
Following gene: 99080512
Centisome position: 22.44
GC content: 63.17
Gene sequence:
>1002_bases ATGGACATCACAGAGCTGAGCAAGAAAATCCTGCAGGCTGACCGAAGGGCGCTGGCCCGGGCGATCACACTGGTCGAAAG CGCACGCGCCGATCATCGCGCACAGGCAGATGCGCTGTTGTCCGAGCTCGCCAAAAGCGACCGTCAGGCATTGCGGATCG GGCTCTCCGGGACACCAGGCGTGGGAAAATCCACCTTCATCGAAGCCTTTGGCATGATGTTGATCGAGCAGGGGCTCAGG GTCGCCGTTCTGGCGGTTGATCCAAGTTCGGCGCGTTCTGGTGGTTCGATCCTTGGCGACAAGACTCGCATGGAGCGGCT GAGCCGGGAGCGCGCGGCCTTCATTCGCCCCAGCCCCAGCCAAAGCCATCTCGGTGGGGTAGCCCGGCGCACCCGCGATG CTGTTGCGCTCTGCGAGGCGGCAGGGTTTGATGTTGTGCTGATCGAAACCGTCGGTGTTGGTCAGTCGGAGACCGTCGTC TCGGAGTTGTCGGACCTGTTCTTGCTCCTGCTTGCGCCTGCGGGCGGGGACGAGCTGCAAGGGGTCAAGCGCGGCATCAT GGAGATCGCGGACATGATCCTCATCAACAAGGCCGATGGCGATCTGAAGGCGACCGCAACCCGAACCTGTGCCGACTATG CCGGGGCCTTGCGGCTTTTGCGCAAACGTCCGCAAGATCCCGAGGGCTTTCCCAAGGCGCTCACGGTTTCTGCCATAGAG GCGGCGGGGCTCGATCAGGCCTGGGAAGAAATTCAGGCGCTTGCCGGGTGGCGACGAGAGAACGGCTTTTGGGACAAGAA CCGTTCACAACAGGCGCAATACTGGTTCGCAGAGGAAGTCCGGCAGGCCCTCCTGTCACGGTTGCAGACTTCCTGGGCCA AGTCCCGCATGGCAGACCTTTCGGCGCAGGTCGCGGGTGGGGCGCAAACACCACAGGATGCGGCGCGCGATATGCTCTTG GGGCTGGGCGTGGGTGATGTGGATCCTTCCGGCGCGCCCTGA
Upstream 100 bases:
>100_bases CCAGAGCCCTTGTGGGAAGCAGTCAGAGTTTATCCGCCCTCCACTGGACAAGCCCGCCCTGACTACGCCATCAATGCGCG GCACAGGTAAAGGGCGCGCC
Downstream 100 bases:
>100_bases AGGAGCGACTCAGGGGCGTAAGCGGCGAAAACCCGGAGGACCAGAAGCCAGGCCCAGGCTTGTAAGCTGCGGCTAAAACT GTAAAAGCGCGCCAGCGCCA
Product: arginine/ornithine transport system ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MDITELSKKILQADRRALARAITLVESARADHRAQADALLSELAKSDRQALRIGLSGTPGVGKSTFIEAFGMMLIEQGLR VAVLAVDPSSARSGGSILGDKTRMERLSRERAAFIRPSPSQSHLGGVARRTRDAVALCEAAGFDVVLIETVGVGQSETVV SELSDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKATATRTCADYAGALRLLRKRPQDPEGFPKALTVSAIE AAGLDQAWEEIQALAGWRRENGFWDKNRSQQAQYWFAEEVRQALLSRLQTSWAKSRMADLSAQVAGGAQTPQDAARDMLL GLGVGDVDPSGAP
Sequences:
>Translated_333_residues MDITELSKKILQADRRALARAITLVESARADHRAQADALLSELAKSDRQALRIGLSGTPGVGKSTFIEAFGMMLIEQGLR VAVLAVDPSSARSGGSILGDKTRMERLSRERAAFIRPSPSQSHLGGVARRTRDAVALCEAAGFDVVLIETVGVGQSETVV SELSDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKATATRTCADYAGALRLLRKRPQDPEGFPKALTVSAIE AAGLDQAWEEIQALAGWRRENGFWDKNRSQQAQYWFAEEVRQALLSRLQTSWAKSRMADLSAQVAGGAQTPQDAARDMLL GLGVGDVDPSGAP >Mature_333_residues MDITELSKKILQADRRALARAITLVESARADHRAQADALLSELAKSDRQALRIGLSGTPGVGKSTFIEAFGMMLIEQGLR VAVLAVDPSSARSGGSILGDKTRMERLSRERAAFIRPSPSQSHLGGVARRTRDAVALCEAAGFDVVLIETVGVGQSETVV SELSDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKATATRTCADYAGALRLLRKRPQDPEGFPKALTVSAIE AAGLDQAWEEIQALAGWRRENGFWDKNRSQQAQYWFAEEVRQALLSRLQTSWAKSRMADLSAQVAGGAQTPQDAARDMLL GLGVGDVDPSGAP
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=329, Percent_Identity=45.5927051671732, Blast_Score=274, Evalue=7e-74, Organism=Escherichia coli, GI1789285, Length=286, Percent_Identity=47.5524475524476, Blast_Score=265, Evalue=5e-72, Organism=Caenorhabditis elegans, GI71994271, Length=330, Percent_Identity=43.3333333333333, Blast_Score=254, Evalue=4e-68, Organism=Caenorhabditis elegans, GI71994275, Length=275, Percent_Identity=45.4545454545455, Blast_Score=232, Evalue=2e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 35691; Mature: 35691
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITELSKKILQADRRALARAITLVESARADHRAQADALLSELAKSDRQALRIGLSGTPG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC VGKSTFIEAFGMMLIEQGLRVAVLAVDPSSARSGGSILGDKTRMERLSRERAAFIRPSPS CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC QSHLGGVARRTRDAVALCEAAGFDVVLIETVGVGQSETVVSELSDLFLLLLAPAGGDELQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHH GVKRGIMEIADMILINKADGDLKATATRTCADYAGALRLLRKRPQDPEGFPKALTVSAIE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AAGLDQAWEEIQALAGWRRENGFWDKNRSQQAQYWFAEEVRQALLSRLQTSWAKSRMADL HHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQVAGGAQTPQDAARDMLLGLGVGDVDPSGAP HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDITELSKKILQADRRALARAITLVESARADHRAQADALLSELAKSDRQALRIGLSGTPG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC VGKSTFIEAFGMMLIEQGLRVAVLAVDPSSARSGGSILGDKTRMERLSRERAAFIRPSPS CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC QSHLGGVARRTRDAVALCEAAGFDVVLIETVGVGQSETVVSELSDLFLLLLAPAGGDELQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHH GVKRGIMEIADMILINKADGDLKATATRTCADYAGALRLLRKRPQDPEGFPKALTVSAIE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AAGLDQAWEEIQALAGWRRENGFWDKNRSQQAQYWFAEEVRQALLSRLQTSWAKSRMADL HHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQVAGGAQTPQDAARDMLLGLGVGDVDPSGAP HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]