| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080503
Identifier: 99080503
GI number: 99080503
Start: 708098
End: 708688
Strand: Reverse
Name: 99080503
Synonym: TM1040_0662
Alternate gene names: NA
Gene position: 708688-708098 (Counterclockwise)
Preceding gene: 99080505
Following gene: 99080499
Centisome position: 22.14
GC content: 63.45
Gene sequence:
>591_bases ATGTCCTGGACTGACGAGCGCGTCGAACTGCTCAAGAAAATGTGGGGCGAAGGCCAGTCGGCCAGTCAGATCGCTAAAGA ACTTGGTGGCGTGACCCGGAATGCGGTGATCGGCAAGGTACACCGCCTCGGTCTGTCCAACCGCACCACCGGCGGCGGCA GCAAGGCTGCAGCCGAGCCAAAAGAAAAGCCCGCGCCCAAGGCGGCCGCAAAGCCCAAGGCTCAGCCAAAGACAGAACCG GCGCGCCCGGTGACGCCGGAGCCAGTGGCCGAGGCCCCCGCTGCAGAGCCGAAGCCCTCGACCCCGGCGCGCAAGCAGAT CATTCCCGCCGGTCAGCCCCTGCCTCCGCAGCCTTCTGCCAATGAAATCCCGGCAGAGGCACTGGCCAAGGTCAATGAGA TCGAGAAGAAAGCCAAGAAGCTCTCTTTGATGGAACTGACCGAGCGAACCTGCAAATGGCCCGTGGGCGATCCCGCAACC GAAGATTTCTGGTTCTGCGGCCTGCCCGTGCAACAGGGCAAACCCTATTGCGAGGCTCATGTGGGCGTTGCCTTCCAGCC GATGAGCTCGCGCCGCGACCGCAAACGCTAA
Upstream 100 bases:
>100_bases CTTGTATCTCGCCCGTCAGTGACTATTGTAGGGCGGAACTCTGGAATTCGATGGCGGCCACAGGTTTCTTGAGGCCGCTA TTAGCTTTGAAAGGCACCTT
Downstream 100 bases:
>100_bases CCAGCTAACCAGCCGTTGCGCTCATCAGCCCATCATGGCTGAATCAGCGCCGACACAGATTTCAACCCCGGCTGCCACTG GCACGCCGGGGTTTCGTTTC
Product: GcrA cell cycle regulator
Products: NA
Alternate protein names: Global Cell Cycle Regulator GcrA; GcrA Cell Cycle Regulator Superfamily; Cell Cycle Regulator GcrA; Gcra Cell Cycle Regulator
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRTTGGGSKAAAEPKEKPAPKAAAKPKAQPKTEP ARPVTPEPVAEAPAAEPKPSTPARKQIIPAGQPLPPQPSANEIPAEALAKVNEIEKKAKKLSLMELTERTCKWPVGDPAT EDFWFCGLPVQQGKPYCEAHVGVAFQPMSSRRDRKR
Sequences:
>Translated_196_residues MSWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRTTGGGSKAAAEPKEKPAPKAAAKPKAQPKTEP ARPVTPEPVAEAPAAEPKPSTPARKQIIPAGQPLPPQPSANEIPAEALAKVNEIEKKAKKLSLMELTERTCKWPVGDPAT EDFWFCGLPVQQGKPYCEAHVGVAFQPMSSRRDRKR >Mature_195_residues SWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRTTGGGSKAAAEPKEKPAPKAAAKPKAQPKTEPA RPVTPEPVAEAPAAEPKPSTPARKQIIPAGQPLPPQPSANEIPAEALAKVNEIEKKAKKLSLMELTERTCKWPVGDPATE DFWFCGLPVQQGKPYCEAHVGVAFQPMSSRRDRKR
Specific function: Unknown
COG id: COG5352
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21153; Mature: 21022
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRTTGGGSKAAAEP CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KEKPAPKAAAKPKAQPKTEPARPVTPEPVAEAPAAEPKPSTPARKQIIPAGQPLPPQPSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC NEIPAEALAKVNEIEKKAKKLSLMELTERTCKWPVGDPATEDFWFCGLPVQQGKPYCEAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCHHHHC VGVAFQPMSSRRDRKR CCEEECCHHHHCCCCC >Mature Secondary Structure SWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRTTGGGSKAAAEP CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KEKPAPKAAAKPKAQPKTEPARPVTPEPVAEAPAAEPKPSTPARKQIIPAGQPLPPQPSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC NEIPAEALAKVNEIEKKAKKLSLMELTERTCKWPVGDPATEDFWFCGLPVQQGKPYCEAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCHHHHC VGVAFQPMSSRRDRKR CCEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA