| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080485
Identifier: 99080485
GI number: 99080485
Start: 689252
End: 689851
Strand: Reverse
Name: 99080485
Synonym: TM1040_0644
Alternate gene names: NA
Gene position: 689851-689252 (Counterclockwise)
Preceding gene: 99080486
Following gene: 99080484
Centisome position: 21.55
GC content: 59.33
Gene sequence:
>600_bases ATGTTCGACTATCTCCAGACCACTCACGATCTCGCCCTGATGGTGGCGCTTCTTGCCGCCATACTGCTCGCAACGCACCT CAGTCTCAGCTTGAAATGCCCCAGTCTTGGTCTTTGGCCTGCCGCTGACGGCTGGCGACATCATCTTGCCTTTGGGCTGT TCCGCGTGTTCTGCGGCGCGACGGTTGTCTTTGCACTGACGGAGATCGGCGTGAATGGGTGGGGCCATTGGCTGCGCTAT GCGGTGGGGCTTCCGCTCATGGTGATGGCCTTCGGAATCACGCTTTGGGGGTACCGGTTCCTCGGGCTCGACAATACCTA TTGCGACACGGGCGGCTTGGTCACGGGTGGCATGTATGAATATTCACGCAATCCGCAGTATGTGACCTCGGTGCTGGCGA CTGTCGGCCTAGGCATCACGACCGGATCCTGGACCACCGTCGCCCTCGCATTGGTGCTCTTTGCGCTCTATTTCCTGTTT GTTCTGAACGAGGAGCGCTGGCTCCTAAAGGGATACGGGAAAGCCTTTGCCGACTACATGCGCTCGACCCCTCGATTTTT GGACGAACGCAGCCTCGAGCGCCTTCGCGCGGCACTCTGA
Upstream 100 bases:
>100_bases ACGGCTGTTACAATCTGCTGTTAGTCGAAGCGGCATCCGAGCCCCTGCCCGGAGCCCGTTGCACAGTCCACGACCTGCCC CAAAAGGAACCGAAGACGCC
Downstream 100 bases:
>100_bases GCCGGCTCCCCCAACGCGGCTCTGCTGGATGTCTTGACAGTGCGGTTTTTTGCGCCAACTCACCGCTGCAGCGGGCATGT GGCGTATCGACACAACGGTT
Product: CzcN domain-containing protein
Products: NA
Alternate protein names: CzcN Domain Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MFDYLQTTHDLALMVALLAAILLATHLSLSLKCPSLGLWPAADGWRHHLAFGLFRVFCGATVVFALTEIGVNGWGHWLRY AVGLPLMVMAFGITLWGYRFLGLDNTYCDTGGLVTGGMYEYSRNPQYVTSVLATVGLGITTGSWTTVALALVLFALYFLF VLNEERWLLKGYGKAFADYMRSTPRFLDERSLERLRAAL
Sequences:
>Translated_199_residues MFDYLQTTHDLALMVALLAAILLATHLSLSLKCPSLGLWPAADGWRHHLAFGLFRVFCGATVVFALTEIGVNGWGHWLRY AVGLPLMVMAFGITLWGYRFLGLDNTYCDTGGLVTGGMYEYSRNPQYVTSVLATVGLGITTGSWTTVALALVLFALYFLF VLNEERWLLKGYGKAFADYMRSTPRFLDERSLERLRAAL >Mature_199_residues MFDYLQTTHDLALMVALLAAILLATHLSLSLKCPSLGLWPAADGWRHHLAFGLFRVFCGATVVFALTEIGVNGWGHWLRY AVGLPLMVMAFGITLWGYRFLGLDNTYCDTGGLVTGGMYEYSRNPQYVTSVLATVGLGITTGSWTTVALALVLFALYFLF VLNEERWLLKGYGKAFADYMRSTPRFLDERSLERLRAAL
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22174; Mature: 22174
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDYLQTTHDLALMVALLAAILLATHLSLSLKCPSLGLWPAADGWRHHLAFGLFRVFCGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH TVVFALTEIGVNGWGHWLRYAVGLPLMVMAFGITLWGYRFLGLDNTYCDTGGLVTGGMYE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHH YSRNPQYVTSVLATVGLGITTGSWTTVALALVLFALYFLFVLNEERWLLKGYGKAFADYM CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RSTPRFLDERSLERLRAAL HCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MFDYLQTTHDLALMVALLAAILLATHLSLSLKCPSLGLWPAADGWRHHLAFGLFRVFCGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH TVVFALTEIGVNGWGHWLRYAVGLPLMVMAFGITLWGYRFLGLDNTYCDTGGLVTGGMYE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHH YSRNPQYVTSVLATVGLGITTGSWTTVALALVLFALYFLFVLNEERWLLKGYGKAFADYM CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RSTPRFLDERSLERLRAAL HCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA