Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080442

Identifier: 99080442

GI number: 99080442

Start: 641536

End: 642342

Strand: Direct

Name: 99080442

Synonym: TM1040_0601

Alternate gene names: NA

Gene position: 641536-642342 (Clockwise)

Preceding gene: 99080441

Following gene: 99080443

Centisome position: 20.04

GC content: 62.08

Gene sequence:

>807_bases
ATGATCCGCTACATTCTTGCCGCAGCCCTGTTGTCCTTCGCCTTTGAGGCGGGTGCGCAGGAGGGAGCCTCCAGCCCCGC
GTCGCCTGAGGCACCGGTGACGCAACCGACAAAGGGCTGCGTTATCCTGCTGCATGGCTTGGCCCGCACCGAGACCTCCT
TTCTGCTGATGGAGGAAGCACTGGTCGCGCGGGATTACGAAGTTGTGCGCCCGGGGTATCCGTCGACCGAACATACGGTG
GAGCGTCTGGCGGATGCGGTGCTGCCGCGCGCCTTTGATGCCTGCACCCAGACACCGGTGCATCTGGTGACCCATTCCAT
GGGCGGCATTCTGGTGCGCTATTGGCTCTCGCACACCCGCCCCGTGACGCTTGGTCGGGTGGTAATGCTGGCGCCGCCAA
ACCAGGGCAGCGAGCTTGTAGATGAGATGGGCGATTGGGCCGTCTTTGACCTGCTGCATGGGCCTGCGGGGCAGGAACTT
GGGACCGGGCCGAACAGCCTCCCCAAACGCCTTCCAGCGGTTGACTATCCGGTTGGAATTGTCGCGGGCAGCCAGTCTCT
GAACCCTGTCTTCTCGGCGCTTCTGCCCGGACCGGATGATGGCAAGGTCTCTGTCGCGAGCACCGCTGTCGAGGGGATGA
AAACCCAGATCATCCTTCCAGTCACCCATACCTATCTGATGAACAACCCACGCGTCATCGCGCAAGTTGTGCAGTTTCTT
GAGACCGAACGTTTTGAGCCTTCGCTTGGCTGGCTTGATGGGGTATTGGGCCGCGACTGGGACGGCGGTCTGAACGGGGT
AGACTGA

Upstream 100 bases:

>100_bases
AGGGATCGGCTTGGTGATCCTTTGCCCCCGCCCGCAACCGAGGCCTCGCAAAGACGCGCAGGGGCTTTCGGGATCCCCGC
CGAACGCCTAAGTACAACCT

Downstream 100 bases:

>100_bases
GCTATGAGTGAAGATGGATACGTCACACTGCGTCTGGTGGGAGCAGATGTGCTGCGCGCAGATGGGCTGGAGCGCAGCGG
GGCGCTGACCCTCGCCGACG

Product: lipase, putative

Products: NA

Alternate protein names: Acetyltransferase Or Hydrolase; Acetyltransferase/Hydrolase; PGAP1 Family Protein; Pgap1 Family Protein; Alpha/Beta Hydrolase; Triacylglycerol Lipase; Cob(I)Alamin Adenosyltransferase; Alpha/Beta Hydrolase Fold Protein; Cob(I)Yrinic Acid A C-Diamide Adenosyltransferase; Alpha/Beta Fold Superfamily Hydrolase/Acyltransferase; Lipase B; Alpha/Beta Family Hydrolase; Lipase LipB

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEALVARDYEVVRPGYPSTEHTV
ERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTRPVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQEL
GTGPNSLPKRLPAVDYPVGIVAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL
ETERFEPSLGWLDGVLGRDWDGGLNGVD

Sequences:

>Translated_268_residues
MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEALVARDYEVVRPGYPSTEHTV
ERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTRPVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQEL
GTGPNSLPKRLPAVDYPVGIVAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL
ETERFEPSLGWLDGVLGRDWDGGLNGVD
>Mature_268_residues
MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEALVARDYEVVRPGYPSTEHTV
ERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTRPVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQEL
GTGPNSLPKRLPAVDYPVGIVAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL
ETERFEPSLGWLDGVLGRDWDGGLNGVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28701; Mature: 28701

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
LVARDYEVVRPGYPSTEHTVERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTR
HHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQELGTGPNSLPKRLPAVDYPVGI
CEEECEEEEEECCCCCHHHHHHHCCCEEHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEE
VAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL
EECCCCHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEEEHHHHHCCCCHHHHHHHHHH
ETERFEPSLGWLDGVLGRDWDGGLNGVD
HHHCCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
LVARDYEVVRPGYPSTEHTVERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTR
HHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQELGTGPNSLPKRLPAVDYPVGI
CEEECEEEEEECCCCCHHHHHHHCCCEEHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEE
VAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL
EECCCCHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEEEHHHHHCCCCHHHHHHHHHH
ETERFEPSLGWLDGVLGRDWDGGLNGVD
HHHCCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA