| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080442
Identifier: 99080442
GI number: 99080442
Start: 641536
End: 642342
Strand: Direct
Name: 99080442
Synonym: TM1040_0601
Alternate gene names: NA
Gene position: 641536-642342 (Clockwise)
Preceding gene: 99080441
Following gene: 99080443
Centisome position: 20.04
GC content: 62.08
Gene sequence:
>807_bases ATGATCCGCTACATTCTTGCCGCAGCCCTGTTGTCCTTCGCCTTTGAGGCGGGTGCGCAGGAGGGAGCCTCCAGCCCCGC GTCGCCTGAGGCACCGGTGACGCAACCGACAAAGGGCTGCGTTATCCTGCTGCATGGCTTGGCCCGCACCGAGACCTCCT TTCTGCTGATGGAGGAAGCACTGGTCGCGCGGGATTACGAAGTTGTGCGCCCGGGGTATCCGTCGACCGAACATACGGTG GAGCGTCTGGCGGATGCGGTGCTGCCGCGCGCCTTTGATGCCTGCACCCAGACACCGGTGCATCTGGTGACCCATTCCAT GGGCGGCATTCTGGTGCGCTATTGGCTCTCGCACACCCGCCCCGTGACGCTTGGTCGGGTGGTAATGCTGGCGCCGCCAA ACCAGGGCAGCGAGCTTGTAGATGAGATGGGCGATTGGGCCGTCTTTGACCTGCTGCATGGGCCTGCGGGGCAGGAACTT GGGACCGGGCCGAACAGCCTCCCCAAACGCCTTCCAGCGGTTGACTATCCGGTTGGAATTGTCGCGGGCAGCCAGTCTCT GAACCCTGTCTTCTCGGCGCTTCTGCCCGGACCGGATGATGGCAAGGTCTCTGTCGCGAGCACCGCTGTCGAGGGGATGA AAACCCAGATCATCCTTCCAGTCACCCATACCTATCTGATGAACAACCCACGCGTCATCGCGCAAGTTGTGCAGTTTCTT GAGACCGAACGTTTTGAGCCTTCGCTTGGCTGGCTTGATGGGGTATTGGGCCGCGACTGGGACGGCGGTCTGAACGGGGT AGACTGA
Upstream 100 bases:
>100_bases AGGGATCGGCTTGGTGATCCTTTGCCCCCGCCCGCAACCGAGGCCTCGCAAAGACGCGCAGGGGCTTTCGGGATCCCCGC CGAACGCCTAAGTACAACCT
Downstream 100 bases:
>100_bases GCTATGAGTGAAGATGGATACGTCACACTGCGTCTGGTGGGAGCAGATGTGCTGCGCGCAGATGGGCTGGAGCGCAGCGG GGCGCTGACCCTCGCCGACG
Product: lipase, putative
Products: NA
Alternate protein names: Acetyltransferase Or Hydrolase; Acetyltransferase/Hydrolase; PGAP1 Family Protein; Pgap1 Family Protein; Alpha/Beta Hydrolase; Triacylglycerol Lipase; Cob(I)Alamin Adenosyltransferase; Alpha/Beta Hydrolase Fold Protein; Cob(I)Yrinic Acid A C-Diamide Adenosyltransferase; Alpha/Beta Fold Superfamily Hydrolase/Acyltransferase; Lipase B; Alpha/Beta Family Hydrolase; Lipase LipB
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEALVARDYEVVRPGYPSTEHTV ERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTRPVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQEL GTGPNSLPKRLPAVDYPVGIVAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL ETERFEPSLGWLDGVLGRDWDGGLNGVD
Sequences:
>Translated_268_residues MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEALVARDYEVVRPGYPSTEHTV ERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTRPVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQEL GTGPNSLPKRLPAVDYPVGIVAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL ETERFEPSLGWLDGVLGRDWDGGLNGVD >Mature_268_residues MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEALVARDYEVVRPGYPSTEHTV ERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTRPVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQEL GTGPNSLPKRLPAVDYPVGIVAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL ETERFEPSLGWLDGVLGRDWDGGLNGVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28701; Mature: 28701
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH LVARDYEVVRPGYPSTEHTVERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTR HHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC PVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQELGTGPNSLPKRLPAVDYPVGI CEEECEEEEEECCCCCHHHHHHHCCCEEHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEE VAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL EECCCCHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEEEHHHHHCCCCHHHHHHHHHH ETERFEPSLGWLDGVLGRDWDGGLNGVD HHHCCCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIRYILAAALLSFAFEAGAQEGASSPASPEAPVTQPTKGCVILLHGLARTETSFLLMEEA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH LVARDYEVVRPGYPSTEHTVERLADAVLPRAFDACTQTPVHLVTHSMGGILVRYWLSHTR HHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC PVTLGRVVMLAPPNQGSELVDEMGDWAVFDLLHGPAGQELGTGPNSLPKRLPAVDYPVGI CEEECEEEEEECCCCCHHHHHHHCCCEEHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEE VAGSQSLNPVFSALLPGPDDGKVSVASTAVEGMKTQIILPVTHTYLMNNPRVIAQVVQFL EECCCCHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEEEHHHHHCCCCHHHHHHHHHH ETERFEPSLGWLDGVLGRDWDGGLNGVD HHHCCCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA