Click here to switch to the map view.

The map label for this gene is 99080382

Identifier: 99080382

GI number: 99080382

Start: 573619

End: 574689

Strand: Reverse

Name: 99080382

Synonym: TM1040_0541

Alternate gene names: NA

Gene position: 574689-573619 (Counterclockwise)

Preceding gene: 99080383

Following gene: 99080381

Centisome position: 17.95

GC content: 63.77

Gene sequence:

>1071_bases
ATGAGCACCATCACCGTTCTCTCCGGTATCGGCGATAAAGGCCCCGCCGCCATGCGCCTTGATACCGGACGCCACCGCTG
GCTTCTGGATTGCGGCTTTGGCCCGGAGGCCAACGCCACCTTTGATCCCGACTGGCTGATCGGGGTCGACGCGGTCTTTG
TGACCCACGACCATATCGACCACATCGGCGGCGCGGCCTACGCCGTGGAGGCGGGCTTGCCGATCTATGCCACCCGTCGC
ACCGCGCAAGCACTGCCACCCTCGGCACAGGTGATCGCGCTCCCTGAACAGGGAGAGACGCACCTTGACGGAATTTGCCT
CACCACCGGTCGCAATGGCCATGCTCTTGGTGGCGTGTGGATGCATTTTGATCTCGGCGCGGGATTGTTCTACTCCGGCG
ATTGGTCTGAAGAGAGCCAATGGTTTGCTTTTGACGAGCCACCAGACGCGGCCACTGCGATTATCGACTGCTCCTATCAC
CTGAGCAACGTCCCCCAAAGCCAGCGACTTCAGGACCTCGACGCGCTGATTGACGACCTTGGTGGCCAGATCCTCTTTCC
GGTGCCGCCCTCTGGCCGCGCGGGCGAGCTGGCGTTGCACCTGATGCACCGCTTTGGCCCCGAAGCGGTTCTGCTCGACC
CCGAATGCTGCGACAGCCTGCGCGCCGCCCTCAGGTCTGGCGGTGTCGCGCCGCGCGCGCAAGAAATTGCGCCGCTGCTG
GAGCGTGGCCCGCTCGATGAGGCCCGGTTTCTGATCTGCGACACCCCAAACGCCGACGGCGGCGCCGCCTGGGCCTATGT
GCGCGCGTGGCGCGAAAGTGGCCGTTTGGGGCGGGATGCTCATGTGATCTTCACAGGTCATATGACCGCCCATGCCCGCG
GCATCGAGGCTGTCGAGGGCGGGTACTTTCGCCGCTGGAACGTTCATCCCCCGCTTTCGGACCAGATCGCCATGATCCGC
CGCCTCGGCACCAAGCGCTACGCCCCCGCCTTCTGCACCATGCCCGAGGACTATCTGGTCGAAGAAGGTTTTGATGCGCA
GGTCTTTTTACACGAAACAGTGGAGCTCTAA

Upstream 100 bases:

>100_bases
CGACAGCCTGGTAACCCAATCCGCAACCCGCTTTGCCCTAGGCGAACAGATCGGCCTGACCCTATCCGCCCCATGGGCCT
TTGCCGCCTAGGAGGATCTC

Downstream 100 bases:

>100_bases
TGGCCTCATTTCCTGCCCTGCCCGCCCGCAGCTTCTGTCTGATCCGACATGGTGAGACGACCGCAAACCGCGATGAAATC
ATCGCGGGGCGGCTCGATGT

Product: beta-lactamase-like

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Domain Protein

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSTITVLSGIGDKGPAAMRLDTGRHRWLLDCGFGPEANATFDPDWLIGVDAVFVTHDHIDHIGGAAYAVEAGLPIYATRR
TAQALPPSAQVIALPEQGETHLDGICLTTGRNGHALGGVWMHFDLGAGLFYSGDWSEESQWFAFDEPPDAATAIIDCSYH
LSNVPQSQRLQDLDALIDDLGGQILFPVPPSGRAGELALHLMHRFGPEAVLLDPECCDSLRAALRSGGVAPRAQEIAPLL
ERGPLDEARFLICDTPNADGGAAWAYVRAWRESGRLGRDAHVIFTGHMTAHARGIEAVEGGYFRRWNVHPPLSDQIAMIR
RLGTKRYAPAFCTMPEDYLVEEGFDAQVFLHETVEL

Sequences:

>Translated_356_residues
MSTITVLSGIGDKGPAAMRLDTGRHRWLLDCGFGPEANATFDPDWLIGVDAVFVTHDHIDHIGGAAYAVEAGLPIYATRR
TAQALPPSAQVIALPEQGETHLDGICLTTGRNGHALGGVWMHFDLGAGLFYSGDWSEESQWFAFDEPPDAATAIIDCSYH
LSNVPQSQRLQDLDALIDDLGGQILFPVPPSGRAGELALHLMHRFGPEAVLLDPECCDSLRAALRSGGVAPRAQEIAPLL
ERGPLDEARFLICDTPNADGGAAWAYVRAWRESGRLGRDAHVIFTGHMTAHARGIEAVEGGYFRRWNVHPPLSDQIAMIR
RLGTKRYAPAFCTMPEDYLVEEGFDAQVFLHETVEL
>Mature_355_residues
STITVLSGIGDKGPAAMRLDTGRHRWLLDCGFGPEANATFDPDWLIGVDAVFVTHDHIDHIGGAAYAVEAGLPIYATRRT
AQALPPSAQVIALPEQGETHLDGICLTTGRNGHALGGVWMHFDLGAGLFYSGDWSEESQWFAFDEPPDAATAIIDCSYHL
SNVPQSQRLQDLDALIDDLGGQILFPVPPSGRAGELALHLMHRFGPEAVLLDPECCDSLRAALRSGGVAPRAQEIAPLLE
RGPLDEARFLICDTPNADGGAAWAYVRAWRESGRLGRDAHVIFTGHMTAHARGIEAVEGGYFRRWNVHPPLSDQIAMIRR
LGTKRYAPAFCTMPEDYLVEEGFDAQVFLHETVEL

Specific function: Unknown

COG id: COG1782

COG function: function code R; Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38756; Mature: 38625

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITVLSGIGDKGPAAMRLDTGRHRWLLDCGFGPEANATFDPDWLIGVDAVFVTHDHID
CCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECEEEEEECCHHH
HIGGAAYAVEAGLPIYATRRTAQALPPSAQVIALPEQGETHLDGICLTTGRNGHALGGVW
HCCCCEEEEECCCCEEEECCHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEECEEE
MHFDLGAGLFYSGDWSEESQWFAFDEPPDAATAIIDCSYHLSNVPQSQRLQDLDALIDDL
EEEECCCCEEECCCCCCCCCEEEECCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHC
GGQILFPVPPSGRAGELALHLMHRFGPEAVLLDPECCDSLRAALRSGGVAPRAQEIAPLL
CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHH
ERGPLDEARFLICDTPNADGGAAWAYVRAWRESGRLGRDAHVIFTGHMTAHARGIEAVEG
HCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCCCHHHCC
GYFRRWNVHPPLSDQIAMIRRLGTKRYAPAFCTMPEDYLVEEGFDAQVFLHETVEL
CCEEEECCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure 
STITVLSGIGDKGPAAMRLDTGRHRWLLDCGFGPEANATFDPDWLIGVDAVFVTHDHID
CEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECEEEEEECCHHH
HIGGAAYAVEAGLPIYATRRTAQALPPSAQVIALPEQGETHLDGICLTTGRNGHALGGVW
HCCCCEEEEECCCCEEEECCHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEECEEE
MHFDLGAGLFYSGDWSEESQWFAFDEPPDAATAIIDCSYHLSNVPQSQRLQDLDALIDDL
EEEECCCCEEECCCCCCCCCEEEECCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHC
GGQILFPVPPSGRAGELALHLMHRFGPEAVLLDPECCDSLRAALRSGGVAPRAQEIAPLL
CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHH
ERGPLDEARFLICDTPNADGGAAWAYVRAWRESGRLGRDAHVIFTGHMTAHARGIEAVEG
HCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCCCHHHCC
GYFRRWNVHPPLSDQIAMIRRLGTKRYAPAFCTMPEDYLVEEGFDAQVFLHETVEL
CCEEEECCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA