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The map label for this gene is ynjF [H]

Identifier: 99080333

GI number: 99080333

Start: 514715

End: 515323

Strand: Direct

Name: ynjF [H]

Synonym: TM1040_0492

Alternate gene names: 99080333

Gene position: 514715-515323 (Clockwise)

Preceding gene: 99080328

Following gene: 99080341

Centisome position: 16.08

GC content: 59.93

Gene sequence:

>609_bases
ATGTTTGATGCCAAGATCCGCCCCCTCATCGACCCGTTTCTGAATGCGCAGGGCGCCCGGCTTGCCGCGCGCGGCGTCAC
GGCCAATCAGGTCACCCTTGCCGGGCTTGGTCTTGGGCTTGCGTCAGCCGGGCTGATCGCAATTGGCCTGACCTGTTGGG
CGCTGGCATTCCTGTTGGCGTCGCGGATGGCGGATGGGCTGGATGGAGCCGTGGCCCGTCAGCACGCCCCAAGTGATTTT
GGTGGCTACCTCGATATTGTCTGTGATTTTGTATTCTACGGCGCTGTACCGCTTGGATTTGTGGCGCTTGCCCCCGAAGC
AAACGGATTGGCCGGGGCGTTCCTGTTGTGCAGCTTTTACGCCAATGGAGCGAGTTTCCTGGGCTATGCGGTGCTGGCAG
AAAAACGCGAAATGAAGACTTCTGCGCGCGGGGTGAAAACGCTCTACTTCACCGGGGGGCTCCTTGAGGGTGCAGAAACC
ATCGGCTTTTTTGTGGTTCTGTGTCTCTGGCCCGACGGGTTTGCGCCACTGGCCTATGTGTTTGGAACCCTGTGTTTTGC
GACGGCTGCATCGCGGGTCGTATTGGCCGCAAAGGTGTTCTCGGCCTGA

Upstream 100 bases:

>100_bases
GCAGACCGGGCGCGCGCAACGCAGAGTTTGGCCTGATCATCACGACGCGGCAGCGGCAACGTGAGTGGATGTTTCACCGT
CTAGCGGTTAGATCTGGATC

Downstream 100 bases:

>100_bases
ACATCTGCACCGTGTCGCGCCGCCCTGGGTCTGCGCCCCGATGGATGCAGGATCTCTTGGAACTGGCGACTGCCACCACA
GCGCGTGCGGATGCAGAATT

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MFDAKIRPLIDPFLNAQGARLAARGVTANQVTLAGLGLGLASAGLIAIGLTCWALAFLLASRMADGLDGAVARQHAPSDF
GGYLDIVCDFVFYGAVPLGFVALAPEANGLAGAFLLCSFYANGASFLGYAVLAEKREMKTSARGVKTLYFTGGLLEGAET
IGFFVVLCLWPDGFAPLAYVFGTLCFATAASRVVLAAKVFSA

Sequences:

>Translated_202_residues
MFDAKIRPLIDPFLNAQGARLAARGVTANQVTLAGLGLGLASAGLIAIGLTCWALAFLLASRMADGLDGAVARQHAPSDF
GGYLDIVCDFVFYGAVPLGFVALAPEANGLAGAFLLCSFYANGASFLGYAVLAEKREMKTSARGVKTLYFTGGLLEGAET
IGFFVVLCLWPDGFAPLAYVFGTLCFATAASRVVLAAKVFSA
>Mature_202_residues
MFDAKIRPLIDPFLNAQGARLAARGVTANQVTLAGLGLGLASAGLIAIGLTCWALAFLLASRMADGLDGAVARQHAPSDF
GGYLDIVCDFVFYGAVPLGFVALAPEANGLAGAFLLCSFYANGASFLGYAVLAEKREMKTSARGVKTLYFTGGLLEGAET
IGFFVVLCLWPDGFAPLAYVFGTLCFATAASRVVLAAKVFSA

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=193, Percent_Identity=43.5233160621762, Blast_Score=144, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 20949; Mature: 20949

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDAKIRPLIDPFLNAQGARLAARGVTANQVTLAGLGLGLASAGLIAIGLTCWALAFLLA
CCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRMADGLDGAVARQHAPSDFGGYLDIVCDFVFYGAVPLGFVALAPEANGLAGAFLLCSFY
HHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
ANGASFLGYAVLAEKREMKTSARGVKTLYFTGGLLEGAETIGFFVVLCLWPDGFAPLAYV
HCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGTLCFATAASRVVLAAKVFSA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDAKIRPLIDPFLNAQGARLAARGVTANQVTLAGLGLGLASAGLIAIGLTCWALAFLLA
CCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRMADGLDGAVARQHAPSDFGGYLDIVCDFVFYGAVPLGFVALAPEANGLAGAFLLCSFY
HHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
ANGASFLGYAVLAEKREMKTSARGVKTLYFTGGLLEGAETIGFFVVLCLWPDGFAPLAYV
HCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGTLCFATAASRVVLAAKVFSA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]