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The map label for this gene is 99080329

Identifier: 99080329

GI number: 99080329

Start: 511342

End: 511809

Strand: Reverse

Name: 99080329

Synonym: TM1040_0488

Alternate gene names: NA

Gene position: 511809-511342 (Counterclockwise)

Preceding gene: 99080330

Following gene: 99080326

Centisome position: 15.99

GC content: 61.54

Gene sequence:

>468_bases
ATGGCCCAGCCCCTCCCTTCCTTTGTCGCGTCTGCACCATCAGGGCCACGCGTTTTGACGCTGGCCATACTCTGTCTGGT
TGCCACCCTCGGCGCGCAGACGGCAGGAGCAGATCCGGATTTTCTGGCGAGCCTCGATTTTGATGGCGATGGCGCGGTGA
CGGTGAGCGAAGTCGCCCTGGTGCGCAATCAGAAGTTCGAGCAGATCGACCGGGACGGCGATGGGTTTATCGATGCGGAC
GAGTTTGATCGCTCGCTTCAAGAGACCAGAACCCGCTTCCGCCAGATGGGTCAGGGCTATGAGGAGCACAGGGCCAGCCC
CGGCCGGATTGACGCCTTCACTTTTGCCGACTCGGATGCGGATGGCCTGATCTCGAGGCGGGAGTTTCACCGCCATTCCG
ACCGCTTCGCTCAGAGCCTTGATCGGGACGGCGATGGCATCGTTTCGGATAGGGATATGGCACGCTAG

Upstream 100 bases:

>100_bases
TTGAAAAAATGACGCTTTTGTAACAGGAGCCCCTCAAAAACCGGGACCTGCGCGCTTAACTCAGAGACAAGCAACACAAG
CAACAACTGCAAGGTGTCTC

Downstream 100 bases:

>100_bases
GCTTAGAGTGCTGTGGACAACACGCTGCGCCCCAGATCCCCGCTTTTGGACACCATGGATGATGCCAGATCGAGCGCTGC
ATCAAAGTCCTGAGGCGTGG

Product: calcium-binding EF-hand

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAQPLPSFVASAPSGPRVLTLAILCLVATLGAQTAGADPDFLASLDFDGDGAVTVSEVALVRNQKFEQIDRDGDGFIDAD
EFDRSLQETRTRFRQMGQGYEEHRASPGRIDAFTFADSDADGLISRREFHRHSDRFAQSLDRDGDGIVSDRDMAR

Sequences:

>Translated_155_residues
MAQPLPSFVASAPSGPRVLTLAILCLVATLGAQTAGADPDFLASLDFDGDGAVTVSEVALVRNQKFEQIDRDGDGFIDAD
EFDRSLQETRTRFRQMGQGYEEHRASPGRIDAFTFADSDADGLISRREFHRHSDRFAQSLDRDGDGIVSDRDMAR
>Mature_154_residues
AQPLPSFVASAPSGPRVLTLAILCLVATLGAQTAGADPDFLASLDFDGDGAVTVSEVALVRNQKFEQIDRDGDGFIDADE
FDRSLQETRTRFRQMGQGYEEHRASPGRIDAFTFADSDADGLISRREFHRHSDRFAQSLDRDGDGIVSDRDMAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16982; Mature: 16851

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPLPSFVASAPSGPRVLTLAILCLVATLGAQTAGADPDFLASLDFDGDGAVTVSEVAL
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHH
VRNQKFEQIDRDGDGFIDADEFDRSLQETRTRFRQMGQGYEEHRASPGRIDAFTFADSDA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCC
DGLISRREFHRHSDRFAQSLDRDGDGIVSDRDMAR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQPLPSFVASAPSGPRVLTLAILCLVATLGAQTAGADPDFLASLDFDGDGAVTVSEVAL
CCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHH
VRNQKFEQIDRDGDGFIDADEFDRSLQETRTRFRQMGQGYEEHRASPGRIDAFTFADSDA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCC
DGLISRREFHRHSDRFAQSLDRDGDGIVSDRDMAR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA