| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is mreC [C]
Identifier: 99080313
GI number: 99080313
Start: 491181
End: 492128
Strand: Reverse
Name: mreC [C]
Synonym: TM1040_0472
Alternate gene names: 99080313
Gene position: 492128-491181 (Counterclockwise)
Preceding gene: 99080314
Following gene: 99080312
Centisome position: 15.37
GC content: 63.29
Gene sequence:
>948_bases TTGGCCAAAGATCGGTCACAGCGCGAAGACTATGCAGGCCCGCTCAAGCGTTTGCTTGTCGGGCTTTTGGTGTTGGTTCT GGCGGTAATATTTCTGGTCTGGCGCATCGACAGCCCCCGTGTGGAGCGATTTCGCGCGCAGGTGGTGGATGCGGTGGTGC CCAATATGCAATGGGCGATGGCGCCGGTCACCGGCGCGATCAATCTGGTGCGCGATTTTCAAAGCTATCAACGTCTGTCG GAACAGAACCGCGAGTTGCGCTCCGAGTTGCGGCAGATGCGTGCCTGGAAAGAAGCAGCCTTGCAGCTGGAGCAGGAAAA CGCCCGCCTTCTGGATTTGAACAACGTCCGTCTTGATCCGCAGCTAACCTATGTCACCGGCGTGGTTTTGGCGGACTCGG GGTCTCCCTTTCGGCAGTCGGTGCTTTTGAATGTCGGCGCGAGAGACGGCATTCAGGACGGCTGGGCCGCGATGGATGGG ATCGGGCTGGTCGGGCGTATTTCCGGCACCGGGCTCGATACCGCGCGGGTGATCCTGCTGACCGACGCCGCAAGCGCGGT GCCTGCAACTCTGCAGCCCTCTGGCCAGACCGCCCTGGTGAGCGGAGACAACACCGCCGCGCCGCTGTTGAATTTCGTCG AAAACCCGGAGCTGGTGCGCCCGGGTGACCGGGTCGTCACATCCGGAGACGGCAAGGTCTTTCCGCCCGGCCTGCTGATC GGACAGGTCGCGCAGGACCGCGCGGGACGGTTGCGGGTGCGGCTCTCGGCGGACTATGAGCGGCTGGAATTCTTGCGTGT GCTGCGCCATCAGGGCAGCGCCCCCATAAGCGATCCCGGCGCTCTGATCGCGCCAGTGCCCGACGATATGATCCCCCTGC CTCGCCCCGAAGGTTTTTTGGAGCGCGCGGCCCCGGGTGGAACACAGGATGAGGGTGACAATGGCTAA
Upstream 100 bases:
>100_bases GAATACGAAAAGCAGCTGCGTCACGCGATCGACTACGACAGCTGACGTCCCGAACAGAGCGGACATGGCTCTGGTTTGAA AGACTGCTGGAAGGAGAGCC
Downstream 100 bases:
>100_bases GACCTCTCCGGCTGCGATCTGGCTCATGCGTGCGGTCTTTGCCGGGGTGGCGCTGTTGATCATGTTCTTTCACCTGCTGC CGCTTGATACGATGCCCCGG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein; Rod Shape-Determining MreC Transmembrane Protein; MreC Rod Shape-Determining Protein; Rod Shape-Determining Protein Mrec; Cell Wall Complex MreBCD Transmembrane Component MreC; Cell Shape-Determining Protein MreC; Cell Shape Determining Protein MreC; Rod Shape Determining Protein MreC
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MAKDRSQREDYAGPLKRLLVGLLVLVLAVIFLVWRIDSPRVERFRAQVVDAVVPNMQWAMAPVTGAINLVRDFQSYQRLS EQNRELRSELRQMRAWKEAALQLEQENARLLDLNNVRLDPQLTYVTGVVLADSGSPFRQSVLLNVGARDGIQDGWAAMDG IGLVGRISGTGLDTARVILLTDAASAVPATLQPSGQTALVSGDNTAAPLLNFVENPELVRPGDRVVTSGDGKVFPPGLLI GQVAQDRAGRLRVRLSADYERLEFLRVLRHQGSAPISDPGALIAPVPDDMIPLPRPEGFLERAAPGGTQDEGDNG
Sequences:
>Translated_315_residues MAKDRSQREDYAGPLKRLLVGLLVLVLAVIFLVWRIDSPRVERFRAQVVDAVVPNMQWAMAPVTGAINLVRDFQSYQRLS EQNRELRSELRQMRAWKEAALQLEQENARLLDLNNVRLDPQLTYVTGVVLADSGSPFRQSVLLNVGARDGIQDGWAAMDG IGLVGRISGTGLDTARVILLTDAASAVPATLQPSGQTALVSGDNTAAPLLNFVENPELVRPGDRVVTSGDGKVFPPGLLI GQVAQDRAGRLRVRLSADYERLEFLRVLRHQGSAPISDPGALIAPVPDDMIPLPRPEGFLERAAPGGTQDEGDNG >Mature_314_residues AKDRSQREDYAGPLKRLLVGLLVLVLAVIFLVWRIDSPRVERFRAQVVDAVVPNMQWAMAPVTGAINLVRDFQSYQRLSE QNRELRSELRQMRAWKEAALQLEQENARLLDLNNVRLDPQLTYVTGVVLADSGSPFRQSVLLNVGARDGIQDGWAAMDGI GLVGRISGTGLDTARVILLTDAASAVPATLQPSGQTALVSGDNTAAPLLNFVENPELVRPGDRVVTSGDGKVFPPGLLIG QVAQDRAGRLRVRLSADYERLEFLRVLRHQGSAPISDPGALIAPVPDDMIPLPRPEGFLERAAPGGTQDEGDNG
Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34236; Mature: 34104
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDRSQREDYAGPLKRLLVGLLVLVLAVIFLVWRIDSPRVERFRAQVVDAVVPNMQWAM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH APVTGAINLVRDFQSYQRLSEQNRELRSELRQMRAWKEAALQLEQENARLLDLNNVRLDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECC QLTYVTGVVLADSGSPFRQSVLLNVGARDGIQDGWAAMDGIGLVGRISGTGLDTARVILL EEEEEEEEEEECCCCHHHHHHHEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEE TDAASAVPATLQPSGQTALVSGDNTAAPLLNFVENPELVRPGDRVVTSGDGKVFPPGLLI ECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEECCCCCEEECCCCCCCCCHHHH GQVAQDRAGRLRVRLSADYERLEFLRVLRHQGSAPISDPGALIAPVPDDMIPLPRPEGFL HHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHH ERAAPGGTQDEGDNG HHCCCCCCCCCCCCC >Mature Secondary Structure AKDRSQREDYAGPLKRLLVGLLVLVLAVIFLVWRIDSPRVERFRAQVVDAVVPNMQWAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH APVTGAINLVRDFQSYQRLSEQNRELRSELRQMRAWKEAALQLEQENARLLDLNNVRLDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECC QLTYVTGVVLADSGSPFRQSVLLNVGARDGIQDGWAAMDGIGLVGRISGTGLDTARVILL EEEEEEEEEEECCCCHHHHHHHEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEE TDAASAVPATLQPSGQTALVSGDNTAAPLLNFVENPELVRPGDRVVTSGDGKVFPPGLLI ECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEECCCCCEEECCCCCCCCCHHHH GQVAQDRAGRLRVRLSADYERLEFLRVLRHQGSAPISDPGALIAPVPDDMIPLPRPEGFL HHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHH ERAAPGGTQDEGDNG HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA