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The map label for this gene is 99080288

Identifier: 99080288

GI number: 99080288

Start: 465297

End: 466481

Strand: Reverse

Name: 99080288

Synonym: TM1040_0447

Alternate gene names: NA

Gene position: 466481-465297 (Counterclockwise)

Preceding gene: 99080293

Following gene: 99080287

Centisome position: 14.57

GC content: 62.11

Gene sequence:

>1185_bases
ATGCGCTTTATGTTTGCTGTTTTCAATCGGGCCCGCAAGATTGCTTTGACCGCCACCGCAGTTGTTGCCTCTGCATTTGT
CGCCGCCTGTGACCCCGGAGCATTGTCCGGCGGGGGGCCGACCATCAACACCTCCAAACCTGTGCCTGTCGCACTGCTGG
TACCGCGCGGTTCGGCACAGCATGGTGATGGCGTTCTGGCCCAGAGCCTTGAAAATGCAGCCCGCCTCGCGATTGCGGAT
CTGAACGGCGTAGAGGTGGACCTGCGTGTCTATGACACAGCGGGCAACCCTGAAACCGCCGCTGCCGTTGCCTCGCAAGC
GGTGCAGGACGGCGCGCGCATCATTCTTGGTCCGGTCTATGCCGAAGCCGCAAATGCCGCAGGGATTGCCGCCGCAAAGC
GCGGTGTGAACGTGCTGGCCTTCTCCAACAATGCCTCGATCGCGGGCGGCAACGTGTTCGTTCTGGGCTCGACCTTTGAG
AACTCCGCCAACCGCTTGACCCAATATGCCAAACGCCAGGGCAAGAACTCCATGGTGGTTGTGTCGGGCAATAATGCCGC
CGGACAGGCCGGGCGTTCTGCCATTCAGCAGGCCGCCGTGCAGAGTGGCATGACCATTACGGGCAACGTCAGCTATGAGC
TGTCGCAGCAGGGTGTGATCAACGCGATCCCGACCATTAGCCAGAATGTGCGTCAGAACAAAGCGGACGTGATGTTCATG
ACCGCGACCACCGCAGGCGCGCTGCCGCTGTTGTCGCAGCTGTTGCCCGAAGCCGGTGTCACGCCAGAAGACGTGCAGTA
CATGGGCCTGACCCGTTGGGACATCCCCGCGCAGACGCTTGAACTGCCCGGAGTTCAGAACGGCTGGTTCGCCCTGCCCG
ACCCACAGAAGTCTGCCTCTTTCCGTGCACGTTATCAATCCGCATATGGCGCGGCACCGCACCCGATCGGTGGTCTGGCC
TATGACGGGATCGCCGCCATTGGCGCGCTGGTCAGCTCTGGCAACTCCGGGGCGCTCACCGGTGCGGCTCTGACACAACC
CGCAGGTTTCCAGGGCACAGGGGGTATTTTCCGCCTGCGCCCGGATGGCACCAGTGAACGTGGTCTCGCCATCGCAACGA
TCCAGGACAAGAAAGTCGTCATCATTGACCCAGCGCCACGAAGCTTCCCCGGAGCCGGTTCCTGA

Upstream 100 bases:

>100_bases
TTTATGATTCACGCTGGACCCGCTTTTCTGGTCGTCTATGATCGCTCCAAACCAAAACGGGTACGCCTCGCATATCGTTG
CGGCCCGGAACAGGGAGTTT

Downstream 100 bases:

>100_bases
ACCGACCAACACTCTCGACAAAACCCATCCTGAACCTCTGGGGTCGCTCATCTGCGACCCCAGTGCGATTTTCGATGCCG
ATGCAATTCGGCTTCGGATC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRFMFAVFNRARKIALTATAVVASAFVAACDPGALSGGGPTINTSKPVPVALLVPRGSAQHGDGVLAQSLENAARLAIAD
LNGVEVDLRVYDTAGNPETAAAVASQAVQDGARIILGPVYAEAANAAGIAAAKRGVNVLAFSNNASIAGGNVFVLGSTFE
NSANRLTQYAKRQGKNSMVVVSGNNAAGQAGRSAIQQAAVQSGMTITGNVSYELSQQGVINAIPTISQNVRQNKADVMFM
TATTAGALPLLSQLLPEAGVTPEDVQYMGLTRWDIPAQTLELPGVQNGWFALPDPQKSASFRARYQSAYGAAPHPIGGLA
YDGIAAIGALVSSGNSGALTGAALTQPAGFQGTGGIFRLRPDGTSERGLAIATIQDKKVVIIDPAPRSFPGAGS

Sequences:

>Translated_394_residues
MRFMFAVFNRARKIALTATAVVASAFVAACDPGALSGGGPTINTSKPVPVALLVPRGSAQHGDGVLAQSLENAARLAIAD
LNGVEVDLRVYDTAGNPETAAAVASQAVQDGARIILGPVYAEAANAAGIAAAKRGVNVLAFSNNASIAGGNVFVLGSTFE
NSANRLTQYAKRQGKNSMVVVSGNNAAGQAGRSAIQQAAVQSGMTITGNVSYELSQQGVINAIPTISQNVRQNKADVMFM
TATTAGALPLLSQLLPEAGVTPEDVQYMGLTRWDIPAQTLELPGVQNGWFALPDPQKSASFRARYQSAYGAAPHPIGGLA
YDGIAAIGALVSSGNSGALTGAALTQPAGFQGTGGIFRLRPDGTSERGLAIATIQDKKVVIIDPAPRSFPGAGS
>Mature_394_residues
MRFMFAVFNRARKIALTATAVVASAFVAACDPGALSGGGPTINTSKPVPVALLVPRGSAQHGDGVLAQSLENAARLAIAD
LNGVEVDLRVYDTAGNPETAAAVASQAVQDGARIILGPVYAEAANAAGIAAAKRGVNVLAFSNNASIAGGNVFVLGSTFE
NSANRLTQYAKRQGKNSMVVVSGNNAAGQAGRSAIQQAAVQSGMTITGNVSYELSQQGVINAIPTISQNVRQNKADVMFM
TATTAGALPLLSQLLPEAGVTPEDVQYMGLTRWDIPAQTLELPGVQNGWFALPDPQKSASFRARYQSAYGAAPHPIGGLA
YDGIAAIGALVSSGNSGALTGAALTQPAGFQGTGGIFRLRPDGTSERGLAIATIQDKKVVIIDPAPRSFPGAGS

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40158; Mature: 40158

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFMFAVFNRARKIALTATAVVASAFVAACDPGALSGGGPTINTSKPVPVALLVPRGSAQ
CEEHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
HGDGVLAQSLENAARLAIADLNGVEVDLRVYDTAGNPETAAAVASQAVQDGARIILGPVY
CCCCHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHH
AEAANAAGIAAAKRGVNVLAFSNNASIAGGNVFVLGSTFENSANRLTQYAKRQGKNSMVV
HHHCCCCHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEE
VSGNNAAGQAGRSAIQQAAVQSGMTITGNVSYELSQQGVINAIPTISQNVRQNKADVMFM
EECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHCCHHHHHHHCCCCCEEEE
TATTAGALPLLSQLLPEAGVTPEDVQYMGLTRWDIPAQTLELPGVQNGWFALPDPQKSAS
EECCCCHHHHHHHHHHCCCCCCCCEEEECEEECCCCHHHEECCCCCCCCEECCCCCCCHH
FRARYQSAYGAAPHPIGGLAYDGIAAIGALVSSGNSGALTGAALTQPAGFQGTGGIFRLR
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCCCCEEEEC
PDGTSERGLAIATIQDKKVVIIDPAPRSFPGAGS
CCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRFMFAVFNRARKIALTATAVVASAFVAACDPGALSGGGPTINTSKPVPVALLVPRGSAQ
CEEHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
HGDGVLAQSLENAARLAIADLNGVEVDLRVYDTAGNPETAAAVASQAVQDGARIILGPVY
CCCCHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHH
AEAANAAGIAAAKRGVNVLAFSNNASIAGGNVFVLGSTFENSANRLTQYAKRQGKNSMVV
HHHCCCCHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEE
VSGNNAAGQAGRSAIQQAAVQSGMTITGNVSYELSQQGVINAIPTISQNVRQNKADVMFM
EECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHCCHHHHHHHCCCCCEEEE
TATTAGALPLLSQLLPEAGVTPEDVQYMGLTRWDIPAQTLELPGVQNGWFALPDPQKSAS
EECCCCHHHHHHHHHHCCCCCCCCEEEECEEECCCCHHHEECCCCCCCCEECCCCCCCHH
FRARYQSAYGAAPHPIGGLAYDGIAAIGALVSSGNSGALTGAALTQPAGFQGTGGIFRLR
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCCCCEEEEC
PDGTSERGLAIATIQDKKVVIIDPAPRSFPGAGS
CCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA