Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080189

Identifier: 99080189

GI number: 99080189

Start: 355964

End: 356425

Strand: Direct

Name: 99080189

Synonym: TM1040_0348

Alternate gene names: NA

Gene position: 355964-356425 (Clockwise)

Preceding gene: 99080188

Following gene: 99080190

Centisome position: 11.12

GC content: 62.55

Gene sequence:

>462_bases
ATGATGATCCAAAGCCAGGTTTACAAAGCCGTATGCGCGCTTGCTGTCCTCACCTCCCTCGGGGGGGCAGCCATGGCGCA
GGACACGGCCACCCCGCCAACGGCCGTCCCTTCACCGGTCGGCGTCGCGATTGAACTCAATGCGTTGCAGGATCAGGCGG
GTGCATGCCGTCTGTCTTTCATGGCGCAAAACAAGGCACAGATCGCCATTGAGACAGCCGTCTACGAGGCCGTGCTGTTT
GATCGGGCCGGAGAGGTGATGCTTCTGACGCTCTTTGATTTTCGCGAGTTGCCGGCCGGGCGTCCGCGGGTGCGCCAGTT
CGATGTTGCTGGTGTGGCCTGCGCGGATCTTGGGCGGGTGCTCATCAACGGCGCCAGCCAATGTCAAAGCAGCGGCGACG
GTGATCTCTGCGAGGCGGGGCTTGGCCTGTCCAGCCGGACGGAAGTGGAGTTGTTGGGATGA

Upstream 100 bases:

>100_bases
GACAAGCAATATCAGACGCATCTGGCGACGCGCCCGGCGCCGGGTCGCAACATCAAAGTGTCGCTGACGGCGGCTTTCTA
ACCAAGGAGCAGAGACGAAG

Downstream 100 bases:

>100_bases
GTGAGATCAGGGAGTTCTGGACGGCAATAAAGGCGTCCTTGCTGGAGGTGGTGGAGATCGGCGGGCCGGTGGTCGTGGTG
CTTATTGGACTGTCGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MMIQSQVYKAVCALAVLTSLGGAAMAQDTATPPTAVPSPVGVAIELNALQDQAGACRLSFMAQNKAQIAIETAVYEAVLF
DRAGEVMLLTLFDFRELPAGRPRVRQFDVAGVACADLGRVLINGASQCQSSGDGDLCEAGLGLSSRTEVELLG

Sequences:

>Translated_153_residues
MMIQSQVYKAVCALAVLTSLGGAAMAQDTATPPTAVPSPVGVAIELNALQDQAGACRLSFMAQNKAQIAIETAVYEAVLF
DRAGEVMLLTLFDFRELPAGRPRVRQFDVAGVACADLGRVLINGASQCQSSGDGDLCEAGLGLSSRTEVELLG
>Mature_153_residues
MMIQSQVYKAVCALAVLTSLGGAAMAQDTATPPTAVPSPVGVAIELNALQDQAGACRLSFMAQNKAQIAIETAVYEAVLF
DRAGEVMLLTLFDFRELPAGRPRVRQFDVAGVACADLGRVLINGASQCQSSGDGDLCEAGLGLSSRTEVELLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15904; Mature: 15904

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIQSQVYKAVCALAVLTSLGGAAMAQDTATPPTAVPSPVGVAIELNALQDQAGACRLSF
CCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
MAQNKAQIAIETAVYEAVLFDRAGEVMLLTLFDFRELPAGRPRVRQFDVAGVACADLGRV
EECCCCEEEHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCEEECCCCHHHHHHHHH
LINGASQCQSSGDGDLCEAGLGLSSRTEVELLG
HHCCHHHHCCCCCCCHHHHCCCCCCCCCEEECC
>Mature Secondary Structure
MMIQSQVYKAVCALAVLTSLGGAAMAQDTATPPTAVPSPVGVAIELNALQDQAGACRLSF
CCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
MAQNKAQIAIETAVYEAVLFDRAGEVMLLTLFDFRELPAGRPRVRQFDVAGVACADLGRV
EECCCCEEEHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCEEECCCCHHHHHHHHH
LINGASQCQSSGDGDLCEAGLGLSSRTEVELLG
HHCCHHHHCCCCCCCHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA