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The map label for this gene is hmuS [H]

Identifier: 99080187

GI number: 99080187

Start: 352602

End: 353681

Strand: Reverse

Name: hmuS [H]

Synonym: TM1040_0346

Alternate gene names: 99080187

Gene position: 353681-352602 (Counterclockwise)

Preceding gene: 99080194

Following gene: 99080186

Centisome position: 11.05

GC content: 62.59

Gene sequence:

>1080_bases
ATGGATCAGGCACATTCCCCTTCCGCCAATGCCCAGAGTGCATTGTCTCCCCAAGTTATCCGCGACCTGCGCGCAGAGCA
TAACGCTTTGCGTGCGCGGGATTTTTGCGACCGCTTTCAGATCCGCGAGGCACAGTTGCTCGCGGCCTATACCGGGCGAG
GCGTGACCCGGCTGCACGCCCATCCCGACGCGGTGATGCCCCAGATCGAACGCCTCGGCGAGGTCATGGCGCTCACCCGC
AATGCCTCCTGCGTGCATGAACGCGTTGGCGTCTATGGCAACTATAAGAGCGGCCCGCATGCCGCGATGATTCTGCAGCC
AGAAATCGACCTGCGCCTCTTTCCAAGCCATTGGATCCACGCCTTTGCCCTGAATGAAGACACCGACACCGGCCCCAAGC
GCTCGATCCAGATCTTTGATGCCGCGGGCGATGCCGTCCACAAGATCCACCTGCGCGAGACCTCCGATCACGCGGCCTGG
GACGAGGTGGTGGCAGCGCTGGCCAGCGGCGACACCTCCGATGTGCTCGAGGTGGCCGCGCGCAAACCCGTAGAGGCGCC
CAAAAGCAACCCTGCCAAATGCGAAGTCTTGCGCGATGAATGGCGCAAGATGACCGATACCCATCAATTCCTGCGCTTGA
CCTCCAAGCTCAAGATGAACCGCTTGGGCGCTTATCGCATCGTCGGCGCGCCCTTTGTGGAGCGCGTGCCCCCCGAAGCC
GTGGACGCCGCCCTGCAGGCACTGGCCAAGAGCAAAACAGAGATCATGCTTTTTGTCGGCAATCGCGGCTGTATCCAGAT
CCACAGCGGGCCCATCGAGACCCTGCGCGCGATGGGGCCTTGGCAGAACGTGATGGATCCACGCTTCAACCTGCACCTGC
GCCTTGATCACATCAAAGAAGTCTATGTGGTCAACAAACCGACCCAGCGCGGCCCGGCGCTCTCGCTCGAGGCCTTTGAC
GGGGAGGGCAACATCATCCTACAGATCTTTGGCCGCAACGCCGAGGCCCGCGACAGCCGCCCCGCATGGGCCGACATCCT
CTCCACCCTGCCCCGTCTGCACACAGAGGAGACCGTGTGA

Upstream 100 bases:

>100_bases
CCGAGCCGATGCACACGGATCGTCTCGGACGTCAGCCTGAACGCCCCGAACCATGAGGGCGCAAGCCAGCAGTCTCCCAA
CCCAAAGTTCGAGGACCCTG

Downstream 100 bases:

>100_bases
TGCGTCACCTTCTCTTGGTCGCGACGGCCACCGCCAGCCTGATGACGGCACCGGTGGCGCAGGCCGCAGACCGGATCCTC
TCGATCGGAGGCTCCGTTAC

Product: hemin-degrading

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MDQAHSPSANAQSALSPQVIRDLRAEHNALRARDFCDRFQIREAQLLAAYTGRGVTRLHAHPDAVMPQIERLGEVMALTR
NASCVHERVGVYGNYKSGPHAAMILQPEIDLRLFPSHWIHAFALNEDTDTGPKRSIQIFDAAGDAVHKIHLRETSDHAAW
DEVVAALASGDTSDVLEVAARKPVEAPKSNPAKCEVLRDEWRKMTDTHQFLRLTSKLKMNRLGAYRIVGAPFVERVPPEA
VDAALQALAKSKTEIMLFVGNRGCIQIHSGPIETLRAMGPWQNVMDPRFNLHLRLDHIKEVYVVNKPTQRGPALSLEAFD
GEGNIILQIFGRNAEARDSRPAWADILSTLPRLHTEETV

Sequences:

>Translated_359_residues
MDQAHSPSANAQSALSPQVIRDLRAEHNALRARDFCDRFQIREAQLLAAYTGRGVTRLHAHPDAVMPQIERLGEVMALTR
NASCVHERVGVYGNYKSGPHAAMILQPEIDLRLFPSHWIHAFALNEDTDTGPKRSIQIFDAAGDAVHKIHLRETSDHAAW
DEVVAALASGDTSDVLEVAARKPVEAPKSNPAKCEVLRDEWRKMTDTHQFLRLTSKLKMNRLGAYRIVGAPFVERVPPEA
VDAALQALAKSKTEIMLFVGNRGCIQIHSGPIETLRAMGPWQNVMDPRFNLHLRLDHIKEVYVVNKPTQRGPALSLEAFD
GEGNIILQIFGRNAEARDSRPAWADILSTLPRLHTEETV
>Mature_359_residues
MDQAHSPSANAQSALSPQVIRDLRAEHNALRARDFCDRFQIREAQLLAAYTGRGVTRLHAHPDAVMPQIERLGEVMALTR
NASCVHERVGVYGNYKSGPHAAMILQPEIDLRLFPSHWIHAFALNEDTDTGPKRSIQIFDAAGDAVHKIHLRETSDHAAW
DEVVAALASGDTSDVLEVAARKPVEAPKSNPAKCEVLRDEWRKMTDTHQFLRLTSKLKMNRLGAYRIVGAPFVERVPPEA
VDAALQALAKSKTEIMLFVGNRGCIQIHSGPIETLRAMGPWQNVMDPRFNLHLRLDHIKEVYVVNKPTQRGPALSLEAFD
GEGNIILQIFGRNAEARDSRPAWADILSTLPRLHTEETV

Specific function: Part of the binding-protein-dependent transport system for hemin [H]

COG id: COG3720

COG function: function code P; Putative heme degradation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemS [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007845 [H]

Pfam domain/function: PF05171 HemS [H]

EC number: NA

Molecular weight: Translated: 40002; Mature: 40002

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAHSPSANAQSALSPQVIRDLRAEHNALRARDFCDRFQIREAQLLAAYTGRGVTRLHA
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
HPDAVMPQIERLGEVMALTRNASCVHERVGVYGNYKSGPHAAMILQPEIDLRLFPSHWIH
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCEE
AFALNEDTDTGPKRSIQIFDAAGDAVHKIHLRETSDHAAWDEVVAALASGDTSDVLEVAA
EEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
RKPVEAPKSNPAKCEVLRDEWRKMTDTHQFLRLTSKLKMNRLGAYRIVGAPFVERVPPEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHH
VDAALQALAKSKTEIMLFVGNRGCIQIHSGPIETLRAMGPWQNVMDPRFNLHLRLDHIKE
HHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHCCCHHHHCCCCEEEEEEECCCEE
VYVVNKPTQRGPALSLEAFDGEGNIILQIFGRNAEARDSRPAWADILSTLPRLHTEETV
EEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDQAHSPSANAQSALSPQVIRDLRAEHNALRARDFCDRFQIREAQLLAAYTGRGVTRLHA
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
HPDAVMPQIERLGEVMALTRNASCVHERVGVYGNYKSGPHAAMILQPEIDLRLFPSHWIH
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCEE
AFALNEDTDTGPKRSIQIFDAAGDAVHKIHLRETSDHAAWDEVVAALASGDTSDVLEVAA
EEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
RKPVEAPKSNPAKCEVLRDEWRKMTDTHQFLRLTSKLKMNRLGAYRIVGAPFVERVPPEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHH
VDAALQALAKSKTEIMLFVGNRGCIQIHSGPIETLRAMGPWQNVMDPRFNLHLRLDHIKE
HHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHCCCHHHHCCCCEEEEEEECCCEE
VYVVNKPTQRGPALSLEAFDGEGNIILQIFGRNAEARDSRPAWADILSTLPRLHTEETV
EEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9026634; 11586360; 12142430 [H]