| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080145
Identifier: 99080145
GI number: 99080145
Start: 310348
End: 310680
Strand: Reverse
Name: 99080145
Synonym: TM1040_0304
Alternate gene names: NA
Gene position: 310680-310348 (Counterclockwise)
Preceding gene: 99080146
Following gene: 99080144
Centisome position: 9.71
GC content: 70.27
Gene sequence:
>333_bases ATGGCCATTCTGATCGCCGGGTTGATCCCGGCGGGCTGGATGCCGGTGACGGCGCAGGATGGCAAGGTGCTGCTGGTGCT CTGTACCCCCGAGGGCGTCGAGGAACGCTGGGTCGATCTGGGCGCGCCTGTGCCGGCCCACGACGAAGACCAAAGCACCA GCCGCGACTGTCCGTTTGCGGCGCAGCCCACGCTTGCGGCGCATGACGCGGTCCTCCTGCCCCTGCCCCTGAGCGGGCCG GAGCGCGATCTCTGGGCGCGCGCGCCGTTTACCCATCACAGCGCTGGCTTTCACTGGCGCTATGACGCCCGCGGCCCGCC CGCTCTCTCCTGA
Upstream 100 bases:
>100_bases CTGACCTCCTCGGAAAAAGGCGACGGCATCGCCACCCTGCGCTCGATTATCGCGCATCTGGACTAGGCGCCTGCGCCGCC TGCTGTCACATCTGGGCCTG
Downstream 100 bases:
>100_bases TCCTTGCAAAAATCACCCTGATTTCACCGCGTTTTAACGTGGTCTTACTGGTATGGAGACATCCCACAATGGCACTCAGC CAAACCACCGGCGTGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAILIAGLIPAGWMPVTAQDGKVLLVLCTPEGVEERWVDLGAPVPAHDEDQSTSRDCPFAAQPTLAAHDAVLLPLPLSGP ERDLWARAPFTHHSAGFHWRYDARGPPALS
Sequences:
>Translated_110_residues MAILIAGLIPAGWMPVTAQDGKVLLVLCTPEGVEERWVDLGAPVPAHDEDQSTSRDCPFAAQPTLAAHDAVLLPLPLSGP ERDLWARAPFTHHSAGFHWRYDARGPPALS >Mature_109_residues AILIAGLIPAGWMPVTAQDGKVLLVLCTPEGVEERWVDLGAPVPAHDEDQSTSRDCPFAAQPTLAAHDAVLLPLPLSGPE RDLWARAPFTHHSAGFHWRYDARGPPALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11840; Mature: 11708
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILIAGLIPAGWMPVTAQDGKVLLVLCTPEGVEERWVDLGAPVPAHDEDQSTSRDCPFA CEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCC AQPTLAAHDAVLLPLPLSGPERDLWARAPFTHHSAGFHWRYDARGPPALS CCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure AILIAGLIPAGWMPVTAQDGKVLLVLCTPEGVEERWVDLGAPVPAHDEDQSTSRDCPFA EEEEEECCCCCCEEEEECCCCEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCC AQPTLAAHDAVLLPLPLSGPERDLWARAPFTHHSAGFHWRYDARGPPALS CCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA