Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080114

Identifier: 99080114

GI number: 99080114

Start: 280364

End: 280579

Strand: Direct

Name: 99080114

Synonym: TM1040_0273

Alternate gene names: NA

Gene position: 280364-280579 (Clockwise)

Preceding gene: 99080113

Following gene: 99080115

Centisome position: 8.76

GC content: 60.19

Gene sequence:

>216_bases
ATGGCACATGTACTGAACACAAACATCGCATCTTCCTCTTTTGTGGCACGCCTGCGCGACGCCATCGAGCAGACCCGCAG
CTCCTGGGCGCTCTACAAGGAATACAAGAACACCTATAACGAGCTGGCCTCCCTCACGGATCGCGACCTGGCCGATATCG
GTGTGCGCCGCTGCGACATTGCAGACCTGGCCCGCAGCCACGTCTACGGCGCCTGA

Upstream 100 bases:

>100_bases
CGCCAACAAGCTGCCTTATCTTCGCAAGTGTCAAAGGAATTGAACAGAGACAACAAGAGCCGCGGAAACCCGTCCCGGCT
AGAGATAAGGACCAAAACAC

Downstream 100 bases:

>100_bases
TCGCGCGTCTGACAGGACTTTTCGGCCAGGTTCCCTTCCTCCTCCCTCGGGGAGCCATGGCCCATCAAGAGCGCCTCCAC
ATCGTGGGGGCGTTTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MAHVLNTNIASSSFVARLRDAIEQTRSSWALYKEYKNTYNELASLTDRDLADIGVRRCDIADLARSHVYGA

Sequences:

>Translated_71_residues
MAHVLNTNIASSSFVARLRDAIEQTRSSWALYKEYKNTYNELASLTDRDLADIGVRRCDIADLARSHVYGA
>Mature_70_residues
AHVLNTNIASSSFVARLRDAIEQTRSSWALYKEYKNTYNELASLTDRDLADIGVRRCDIADLARSHVYGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8005; Mature: 7874

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHVLNTNIASSSFVARLRDAIEQTRSSWALYKEYKNTYNELASLTDRDLADIGVRRCDI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
ADLARSHVYGA
HHHHHHHCCCC
>Mature Secondary Structure 
AHVLNTNIASSSFVARLRDAIEQTRSSWALYKEYKNTYNELASLTDRDLADIGVRRCDI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
ADLARSHVYGA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA