| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080044
Identifier: 99080044
GI number: 99080044
Start: 221389
End: 221739
Strand: Direct
Name: 99080044
Synonym: TM1040_0203
Alternate gene names: NA
Gene position: 221389-221739 (Clockwise)
Preceding gene: 99080043
Following gene: 99080045
Centisome position: 6.92
GC content: 58.97
Gene sequence:
>351_bases ATGCGTTACATTCGCTATGCCGTATGGGGCGTTCTGGCGGTGGTGCTTGTCTCCGTCAGTCTCGCCAATCGCGGCCTCGT GAGTTTGAAACTGATGCCTGAGGCGTTGGCGGAACTGGTCGGGTTCAACCCCTCCATCACGCTACCTTTGTTTGTCGTGG TGCTTGGGGGGCTCGCCCTCGGCGTAGCGCTTGGGTATGTGCTCGAGTACCTGCGCGAGTACAAGCACCGCCGTGAGGCC CGCGTGAAGCACGGTGAAGTCAAAAAACTGTCGCGCGAAGTGAAACGTCTCAAGCGTCAAAAACACGAAGGCAAGGACGA GGTTCTCGCCCTTCTGGACGACGCCTCCTGA
Upstream 100 bases:
>100_bases CCCGCGCACCGGCGAGACGGTGCATGTTGAAGAAAAGCATGTGCCTTTCTTCAAGACGGGTAAGCTTCTGCGCGACAGGT TGAACGGAAAAGAAGAGTAA
Downstream 100 bases:
>100_bases TATGGCAGATATTCGGGTCAAGATTTGCGGCATGAAGACGCGCGCCGACATGGAGGCTGCGGCAGCTGCAGGCGCGGCCT ATGTGGGTCTGAATTTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRYIRYAVWGVLAVVLVSVSLANRGLVSLKLMPEALAELVGFNPSITLPLFVVVLGGLALGVALGYVLEYLREYKHRREA RVKHGEVKKLSREVKRLKRQKHEGKDEVLALLDDAS
Sequences:
>Translated_116_residues MRYIRYAVWGVLAVVLVSVSLANRGLVSLKLMPEALAELVGFNPSITLPLFVVVLGGLALGVALGYVLEYLREYKHRREA RVKHGEVKKLSREVKRLKRQKHEGKDEVLALLDDAS >Mature_116_residues MRYIRYAVWGVLAVVLVSVSLANRGLVSLKLMPEALAELVGFNPSITLPLFVVVLGGLALGVALGYVLEYLREYKHRREA RVKHGEVKKLSREVKRLKRQKHEGKDEVLALLDDAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12995; Mature: 12995
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYIRYAVWGVLAVVLVSVSLANRGLVSLKLMPEALAELVGFNPSITLPLFVVVLGGLAL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GVALGYVLEYLREYKHRREARVKHGEVKKLSREVKRLKRQKHEGKDEVLALLDDAS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure MRYIRYAVWGVLAVVLVSVSLANRGLVSLKLMPEALAELVGFNPSITLPLFVVVLGGLAL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GVALGYVLEYLREYKHRREARVKHGEVKKLSREVKRLKRQKHEGKDEVLALLDDAS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA