Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yhbN [C]

Identifier: 99079866

GI number: 99079866

Start: 25581

End: 26015

Strand: Reverse

Name: yhbN [C]

Synonym: TM1040_0025

Alternate gene names: 99079866

Gene position: 26015-25581 (Counterclockwise)

Preceding gene: 99079867

Following gene: 99079865

Centisome position: 0.81

GC content: 60.46

Gene sequence:

>435_bases
ATGGCGCAGGGGACAGGCGTGTCCTTTGGGGTGCTGCAAACGGACACTTCGCAGCCCGTTGATATTGCCTCTGACAATAT
GAGCGTCAATCAAGAAGATGGCTCTGCGTTGCTGACAGGCAATGTGCTGATTATCCAGGGCGAAATGCGCCTGAGTGCGG
ACAACGTGCTTGTGGTCCGGCGCACTGAAGGCAACGGGATCGAACGCCTAGAGGCGCGCGGCAACGTTCTGCTCGTAAGT
GGCGAGGATGCTGCCGAGGCGCGCGAGGCGGATTACACCATTCAGAGTGGTACCGTGGTGATGCGTGGCAATGTGCTTTT
GACGCAGCAGGGCAGTACCCTTGGCGCAGAGCAGATGACGGTCAATATGACCACCGGGAATGCCACGCTGAGCGGCCGCG
TGCGCACCACCCTGCCGGGCAGTGGCGGCAACTGA

Upstream 100 bases:

>100_bases
GGTGTACGATCCTGCAAAAATAGAAAGATAACCCGTGCGACGACTGACATTTGTTATTCTTCTTGGTTTGATTTGCATCT
TGCATGCCCCATCCGCCGCA

Downstream 100 bases:

>100_bases
TGGCAAAACCAAAACTAGAAGTCACCTCCGGCTCGTCGGGTCTGCGCATTGAGAAGATGCGCAAAAGCTATCGCAAACGT
GTGGTGATCCGTGACGTCTC

Product: OstA-like protein

Products: NA

Alternate protein names: Lipopolysaccharide Transport Periplasmic Protein LptA; Cell Envelope Biogenesis Protein YhbN; OstA-Like Protein; Cell Envelope Biogenesis YhbN

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAQGTGVSFGVLQTDTSQPVDIASDNMSVNQEDGSALLTGNVLIIQGEMRLSADNVLVVRRTEGNGIERLEARGNVLLVS
GEDAAEAREADYTIQSGTVVMRGNVLLTQQGSTLGAEQMTVNMTTGNATLSGRVRTTLPGSGGN

Sequences:

>Translated_144_residues
MAQGTGVSFGVLQTDTSQPVDIASDNMSVNQEDGSALLTGNVLIIQGEMRLSADNVLVVRRTEGNGIERLEARGNVLLVS
GEDAAEAREADYTIQSGTVVMRGNVLLTQQGSTLGAEQMTVNMTTGNATLSGRVRTTLPGSGGN
>Mature_143_residues
AQGTGVSFGVLQTDTSQPVDIASDNMSVNQEDGSALLTGNVLIIQGEMRLSADNVLVVRRTEGNGIERLEARGNVLLVSG
EDAAEAREADYTIQSGTVVMRGNVLLTQQGSTLGAEQMTVNMTTGNATLSGRVRTTLPGSGGN

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14955; Mature: 14824

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQGTGVSFGVLQTDTSQPVDIASDNMSVNQEDGSALLTGNVLIIQGEMRLSADNVLVVR
CCCCCCCEEEEEECCCCCCCEEECCCCEEECCCCCEEEECCEEEEECCEEECCCCEEEEE
RTEGNGIERLEARGNVLLVSGEDAAEAREADYTIQSGTVVMRGNVLLTQQGSTLGAEQMT
ECCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCEEEEECCEEEEECCCCCCCCEEE
VNMTTGNATLSGRVRTTLPGSGGN
EEEECCCEEEECEEEEECCCCCCC
>Mature Secondary Structure 
AQGTGVSFGVLQTDTSQPVDIASDNMSVNQEDGSALLTGNVLIIQGEMRLSADNVLVVR
CCCCCCEEEEEECCCCCCCEEECCCCEEECCCCCEEEECCEEEEECCEEECCCCEEEEE
RTEGNGIERLEARGNVLLVSGEDAAEAREADYTIQSGTVVMRGNVLLTQQGSTLGAEQMT
ECCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCEEEEECCEEEEECCCCCCCCEEE
VNMTTGNATLSGRVRTTLPGSGGN
EEEECCCEEEECEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA