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The map label for this gene is yokA [H]

Identifier: 94995113

GI number: 94995113

Start: 1665419

End: 1667092

Strand: Direct

Name: yokA [H]

Synonym: MGAS10750_Spy1717

Alternate gene names: 94995113

Gene position: 1665419-1667092 (Clockwise)

Preceding gene: 94995112

Following gene: 94995114

Centisome position: 85.97

GC content: 29.99

Gene sequence:

>1674_bases
GTGATGGAAAAATTTGCTTGTATGTATCTTCGTTTATCGAGAGAGGATGGAGATAGCACAGAAAGTAATTCTATTTCAAA
TCAAAGACAGATTATCAAGTCATATGCAAGGGACAATGATTTTAAAGTTGTTGCTGAATATGTAGACGATGGATTTTCAG
GATCTAATTTTGATAGACCAAAATTTAAGAAGATGATTCAAGATCTTGAAGAAAAGAAGTTCAAAACAATTATTGTGAAG
GACTTATCCCGTTTCGGGAGAGATTATATCGAATCAGGAAAATATCTACAAAAGATATTTCCAGAAAAAGGTATAAGGTT
TATATCCGTAAACGATAACTATGACAGTGAAAATGCAGATGTAAGCGATACACACCTAATTCTTCCGATAAGAAACTTTA
TTAATGATTCTTATTGTAGGGATATTTCTATGAAGGTTAAATCTTCAAAAGAAATTAAAAGGAAGAATGGTGAATTTATT
GGTGCATTTGCTCCTTTTGGTTATAAGAAGGATAGCAAAAACAAACATAAGTTAGTCGTTGATACAGAAGTTTCGCATAT
AATTGAAAGAATCTTCAATATGAAGATAGACGGTTACTCATCTAAGGCTATTGCAGATTTTTTAAATAGTATAGGTTGTG
TAACACCATCTAAGCATAAAGAAAATTCTGGCGATAATCATACCACTGGTTTTATTGTTAAAGACTCTAAATGGGACGCA
AAAATGGTCAATAGGATTATTACAAACAAGGTCTATATAGGAGTGCTTGAACAAGGGAAAACTAGAAAACTAAATTACAA
GTCTAAGAGAGAAGTAGAAGTAAATGAAGAAGATTGGATTGTAATAAACGACTCTCATAAGCCTATTATTTCTAAAAGCA
TTTATGCTTTGGCTAACAAGATGATGCTCCGAGATGTAAAACAATCGGCAGATATACCACATATTTTATCAGGAATGCTT
TATTGCAAAGATTGTGGATCTTCAATGGTTAGAAGAAAGGTTAAGTCCAAGAATGGATATAATATTTTTTATATTTGTTC
TCACTATAATAACAAAGGAGATTGCACAAGACATAGTATAAAAGAAGACTATCTAATGGATATGACTCTTTTTGCACTTA
AAGATTATTTGAAAAAATATAATGAACTACTAAGTCAAGTTAATAAGTTAGATGTATCAAAAGTTACATTTAATATTGAC
TTTGAAAGCTTAAACTCAGAAAAGAGAAAGTATGAAAGACTTAGACAATCTTTATATATGGATTTAGAAGACGAACTTAT
AACTTCTGAAGAGTTTGAAAGGTTCAGAAAAAATTATCTTATTAAGATCAGGGAAATAGAGAAACAAATTGCTACAAAGA
AAAATATACTTGCCAATTTGCAAGAAAAGATGAAAAACAAGGACAGTTTGGTTTCTGAAATTGTTCCCACTGATTTAAGC
AGTCTAAATAGGCTAACAATTGTATCTTTTATAGATAGAATTGAAATCGGAGAAAATAATGAGATTAATTTTGTCTTTAA
TAATTTGGAAACAGTTAACTTACTGAAGACCCTTATAAAAGAAGAAAGTGAAAGTAAGTCTGAAGTAAAGAAAAATTTGA
TTTCAATAAATAAGGTCTTTGGAAATGCTCTTGAAAATAAGACTCCAATGCAATTAGTTGGAGGTGTTTTATAA

Upstream 100 bases:

>100_bases
TAAGCTGGGGTGCTGACTTAAAAACTTGGGTGCGGTAAAATATAAGTGGTAGAAGAACTCCTTAATGACTATTTGCCCAA
ATACAAATTAAGGAGGTTTT

Downstream 100 bases:

>100_bases
TGGCAAGAACTTCCAAAAGATATATTGAAAAGAAAAGTGAAAAGACAGAAAGAAAAGTCTTTAAGGCCGGAATTTATACA
AGACTATCTAACGAAAGAAC

Product: Site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MMEKFACMYLRLSREDGDSTESNSISNQRQIIKSYARDNDFKVVAEYVDDGFSGSNFDRPKFKKMIQDLEEKKFKTIIVK
DLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYDSENADVSDTHLILPIRNFINDSYCRDISMKVKSSKEIKRKNGEFI
GAFAPFGYKKDSKNKHKLVVDTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNHTTGFIVKDSKWDA
KMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHKPIISKSIYALANKMMLRDVKQSADIPHILSGML
YCKDCGSSMVRRKVKSKNGYNIFYICSHYNNKGDCTRHSIKEDYLMDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNID
FESLNSEKRKYERLRQSLYMDLEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQEKMKNKDSLVSEIVPTDLS
SLNRLTIVSFIDRIEIGENNEINFVFNNLETVNLLKTLIKEESESKSEVKKNLISINKVFGNALENKTPMQLVGGVL

Sequences:

>Translated_557_residues
MMEKFACMYLRLSREDGDSTESNSISNQRQIIKSYARDNDFKVVAEYVDDGFSGSNFDRPKFKKMIQDLEEKKFKTIIVK
DLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYDSENADVSDTHLILPIRNFINDSYCRDISMKVKSSKEIKRKNGEFI
GAFAPFGYKKDSKNKHKLVVDTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNHTTGFIVKDSKWDA
KMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHKPIISKSIYALANKMMLRDVKQSADIPHILSGML
YCKDCGSSMVRRKVKSKNGYNIFYICSHYNNKGDCTRHSIKEDYLMDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNID
FESLNSEKRKYERLRQSLYMDLEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQEKMKNKDSLVSEIVPTDLS
SLNRLTIVSFIDRIEIGENNEINFVFNNLETVNLLKTLIKEESESKSEVKKNLISINKVFGNALENKTPMQLVGGVL
>Mature_557_residues
MMEKFACMYLRLSREDGDSTESNSISNQRQIIKSYARDNDFKVVAEYVDDGFSGSNFDRPKFKKMIQDLEEKKFKTIIVK
DLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYDSENADVSDTHLILPIRNFINDSYCRDISMKVKSSKEIKRKNGEFI
GAFAPFGYKKDSKNKHKLVVDTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNHTTGFIVKDSKWDA
KMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHKPIISKSIYALANKMMLRDVKQSADIPHILSGML
YCKDCGSSMVRRKVKSKNGYNIFYICSHYNNKGDCTRHSIKEDYLMDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNID
FESLNSEKRKYERLRQSLYMDLEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQEKMKNKDSLVSEIVPTDLS
SLNRLTIVSFIDRIEIGENNEINFVFNNLETVNLLKTLIKEESESKSEVKKNLISINKVFGNALENKTPMQLVGGVL

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786756, Length=409, Percent_Identity=24.9388753056235, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 64603; Mature: 64603

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEKFACMYLRLSREDGDSTESNSISNQRQIIKSYARDNDFKVVAEYVDDGFSGSNFDRP
CCCHHEEHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH
KFKKMIQDLEEKKFKTIIVKDLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYDSENAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCEEEEEECCCCCCCCCC
VSDTHLILPIRNFINDSYCRDISMKVKSSKEIKRKNGEFIGAFAPFGYKKDSKNKHKLVV
CCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEE
DTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNHTTGFIVKDSKWDA
ECHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
KMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHKPIISKSIYALANK
HHHHHHHHCHHEEEEECCCCCCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHH
MMLRDVKQSADIPHILSGMLYCKDCGSSMVRRKVKSKNGYNIFYICSHYNNKGDCTRHSI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH
KEDYLMDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNIDFESLNSEKRKYERLRQSLYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHCCHHHHHHHHHHHHHCC
DLEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQEKMKNKDSLVSEIVPTDLS
CCHHHHCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SLNRLTIVSFIDRIEIGENNEINFVFNNLETVNLLKTLIKEESESKSEVKKNLISINKVF
HCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GNALENKTPMQLVGGVL
HHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MMEKFACMYLRLSREDGDSTESNSISNQRQIIKSYARDNDFKVVAEYVDDGFSGSNFDRP
CCCHHEEHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH
KFKKMIQDLEEKKFKTIIVKDLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYDSENAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCEEEEEECCCCCCCCCC
VSDTHLILPIRNFINDSYCRDISMKVKSSKEIKRKNGEFIGAFAPFGYKKDSKNKHKLVV
CCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEE
DTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNHTTGFIVKDSKWDA
ECHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
KMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHKPIISKSIYALANK
HHHHHHHHCHHEEEEECCCCCCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHH
MMLRDVKQSADIPHILSGMLYCKDCGSSMVRRKVKSKNGYNIFYICSHYNNKGDCTRHSI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH
KEDYLMDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNIDFESLNSEKRKYERLRQSLYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHCCHHHHHHHHHHHHHCC
DLEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQEKMKNKDSLVSEIVPTDLS
CCHHHHCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SLNRLTIVSFIDRIEIGENNEINFVFNNLETVNLLKTLIKEESESKSEVKKNLISINKVF
HCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GNALENKTPMQLVGGVL
HHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]