Click here to switch to the map view.

The map label for this gene is gid [H]

Identifier: 94994438

GI number: 94994438

Start: 987347

End: 988741

Strand: Direct

Name: gid [H]

Synonym: MGAS10750_Spy1042

Alternate gene names: 94994438

Gene position: 987347-988741 (Clockwise)

Preceding gene: 94994437

Following gene: 94994439

Centisome position: 50.97

GC content: 43.8

Gene sequence:

>1395_bases
GTGGGTCTGTCATCTAAGAGATGTCATTCCCGAAGAGGTATTAGTGACTTGTCTCAATCAACTGCAACTTATATTAATGT
TATTGGAGCTGGACTAGCTGGTTCTGAAGCTGCCTATCAGATTGCTAAGCGCGGTATCCCCGTTAAATTGTATGAAATGC
GTGGTGTCAAAGCAACACCGCAACATAAAACCACTAATTTTGCCGAATTGGTCTGTTCCAACTCATTTCGTGGTGATAGC
TTAACCAATGCAGTCGGTCTTCTCAAAGAAGAAATGCGGCGATTAGACTCCATTATCATGCGTAATGGTGAAGCTAATCG
TGTACCTGCTGGGGGAGCAATGGCTGTTGACCGTGAGGGGTATGCAGAGAGTGTCACTGCAGAGTTGGAAAATCATCCTC
TCATTGAGGTCATTCGTGATGAAATCACAGAAATCCCTGACGATGCCATTACGGTTATCGCGACGGGTCCATTGACTTCA
GATGCCTTGGCAGAAAAAATTCACGCGCTAAATGGTGGCGACGGATTCTATTTTTACGATGCAGCAGCGCCTATCATTGA
TAAATCTACCATTGATATGAGCAAGGTTTACCTTAAATCTCGCTACGATAAAGGCGAAGCTGCTTACCTCAACTGCCCTA
TGACCAAGGAAGAATTCATGGCTTTCCATGATGCTCTGACAACCGCAGAAGAAGCACCGCTGAATGCCTTTGAAAAAGAA
AAGTATTTTGAAGGCTGTATGCCGATTGAAGTTATGGCTAAACGTGGCATTAAAACCATGCTTTATGGACCTATGAAACC
CGTTGGATTGGAATATCCAGATGACTATACAGGTCCTCGCGATGGAGAATTTAAAACGCCATATGCTGTTGTGCAATTGC
GTCAAGATAATGCAGCTGGAAGCCTTTATAATATCGTTGGTTTCCAAACCCATCTCAAATGGGGTGAGCAAAAACGCGTT
TTCCAAATGATTCCAGGGCTTGAAAATGCTGAGTTTGTCCGCTACGGCGTCATGCATCGCAATTCCTATATGGATTCACC
AAATCTTTTAACGGAAACCTTCCAATCTCGGAGCAATCCAAACCTTTTCTTTGCAGGTCAGATGACTGGAGTTGAAGGTT
ATGTCGAATCAGCTGCTTCAGGTTTAGTAGCAGGAATCAATGCTGCTCGTTTGTTCAAAAGAGAAGAAGCACTTATTTTT
CCTCAGACAACAGCTATTGGGAGTTTGCCTCATTATGTGACTCATGCCGACAGTAAGCATTTCCAACCAATGAACGTCAA
CTTTGGCATCATCAAAGAGTTAGAAGGCCCACGCATTCGTGACAAAAAAGAACGTTATGCAGCTATTGCTAGTCGTGCTT
TGGCAGATTTAGACACCTGCTTAGCGTCGCTTTAA

Upstream 100 bases:

>100_bases
GAAAAGGGTTCCCGTAGAAAGAGGCTAACGCTTAGTCTCTTTCTTTTTCTTTCTTCTTATTTCTGTTATAATAAGTCAGG
TAACTACATTAGAAAGATTT

Downstream 100 bases:

>100_bases
CACTAAAAAAGAGTTCCTTTTCAGTTGAGTTGCTGAAGAGGACTTTTTTATTTGCTGATTTGAGCGCTAGCTATGCAAAA
GAATGCACAAAAAATACATG

Product: tRNA (uracil-5-)-methyltransferase Gid

Products: NA

Alternate protein names: Folate-dependent tRNA (uracil-5-)-methyltransferase; Folate-dependent tRNA(M-5-U54)-methyltransferase [H]

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MGLSSKRCHSRRGISDLSQSTATYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSFRGDS
LTNAVGLLKEEMRRLDSIIMRNGEANRVPAGGAMAVDREGYAESVTAELENHPLIEVIRDEITEIPDDAITVIATGPLTS
DALAEKIHALNGGDGFYFYDAAAPIIDKSTIDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFHDALTTAEEAPLNAFEKE
KYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRV
FQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKREEALIF
PQTTAIGSLPHYVTHADSKHFQPMNVNFGIIKELEGPRIRDKKERYAAIASRALADLDTCLASL

Sequences:

>Translated_464_residues
MGLSSKRCHSRRGISDLSQSTATYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSFRGDS
LTNAVGLLKEEMRRLDSIIMRNGEANRVPAGGAMAVDREGYAESVTAELENHPLIEVIRDEITEIPDDAITVIATGPLTS
DALAEKIHALNGGDGFYFYDAAAPIIDKSTIDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFHDALTTAEEAPLNAFEKE
KYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRV
FQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKREEALIF
PQTTAIGSLPHYVTHADSKHFQPMNVNFGIIKELEGPRIRDKKERYAAIASRALADLDTCLASL
>Mature_463_residues
GLSSKRCHSRRGISDLSQSTATYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSFRGDSL
TNAVGLLKEEMRRLDSIIMRNGEANRVPAGGAMAVDREGYAESVTAELENHPLIEVIRDEITEIPDDAITVIATGPLTSD
ALAEKIHALNGGDGFYFYDAAAPIIDKSTIDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFHDALTTAEEAPLNAFEKEK
YFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVF
QMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKREEALIFP
QTTAIGSLPHYVTHADSKHFQPMNVNFGIIKELEGPRIRDKKERYAAIASRALADLDTCLASL

Specific function: Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs [H]

COG id: COG1206

COG function: function code J; NAD(FAD)-utilizing enzyme possibly involved in translation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family. TrmFO subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367273, Length=90, Percent_Identity=42.2222222222222, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004417
- InterPro:   IPR002218
- InterPro:   IPR020595
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01134 GIDA [H]

EC number: =2.1.1.74 [H]

Molecular weight: Translated: 51165; Mature: 51034

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSSKRCHSRRGISDLSQSTATYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATP
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
QHKTTNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRNGEANRVPAGGAMAVDREG
CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
YAESVTAELENHPLIEVIRDEITEIPDDAITVIATGPLTSDALAEKIHALNGGDGFYFYD
CHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEC
AAAPIIDKSTIDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFHDALTTAEEAPLNAFEKE
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHH
KYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAG
HHHCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
SLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNP
CHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
NLFFAGQMTGVEGYVESAASGLVAGINAARLFKREEALIFPQTTAIGSLPHYVTHADSKH
CEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCHHHHCCCCHHHCCCCCCC
FQPMNVNFGIIKELEGPRIRDKKERYAAIASRALADLDTCLASL
CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLSSKRCHSRRGISDLSQSTATYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATP
CCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
QHKTTNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRNGEANRVPAGGAMAVDREG
CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
YAESVTAELENHPLIEVIRDEITEIPDDAITVIATGPLTSDALAEKIHALNGGDGFYFYD
CHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEC
AAAPIIDKSTIDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFHDALTTAEEAPLNAFEKE
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHH
KYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAG
HHHCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
SLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNP
CHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
NLFFAGQMTGVEGYVESAASGLVAGINAARLFKREEALIFPQTTAIGSLPHYVTHADSKH
CEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCHHHHCCCCHHHCCCCCCC
FQPMNVNFGIIKELEGPRIRDKKERYAAIASRALADLDTCLASL
CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]