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The map label for this gene is ybhK [C]

Identifier: 94993954

GI number: 94993954

Start: 543949

End: 544926

Strand: Direct

Name: ybhK [C]

Synonym: MGAS10750_Spy0558

Alternate gene names: 94993954

Gene position: 543949-544926 (Clockwise)

Preceding gene: 94993953

Following gene: 94993955

Centisome position: 28.08

GC content: 42.02

Gene sequence:

>978_bases
ATGAAAAATCCTAAAATGACTGTTATAGGTGGGGGTACTGGCATCTCCATTATCCTAAAAAGCCTTCGTAATGAAGCAGT
TGATATTACTGCTGTGGTCACTGTTGCAGATGATGGTGGTTCCTCAGGAGAACTTCGTAATGCCATGCAATTAGCCCCGC
CAGGAGACTTACGGAATGTCTTGTTAGCGATGAGTGACATGCCAAAATTTTATGAGCGGGTTTTCCAATACCGTTTTAAC
GAGAGTGATGGAGCCTTGGCTGGTCACCCTCTAGGCAATCTCATTATTGCTGGTATCTCTGAAATGCAAGGCTCAACCTA
CAATGCCATTCAAATTTTAACCAAATTTTTCCATATTACAGGTAAAATTTACCCCTCTAGCGAGCAGGCCTTGACCCTTC
ATGCTGTTTTTAAAGATGGGCATGAAGTAGCAGGAGAAAGTTCTATTGCCAAATACCAAGGCATGATTGACCATGTCTAT
GTGACCAACACCTACAACGACCAAAAGCCTCAGGCCAGTCGTAAGGTGGTTGAGGCTATTCTAGAAAGTGACATGATTGT
CTTGGGACCAGGCTCACTGTTTACCTCTATTTTACCTAATTTGGTCATTCCAGAAATTAAAGAAGCTTTGCGCCAGACTA
AAGCAGAAGTGGTGTATATTTGTAATATCATGACCCAGTATGGTGAAACAGAACAATTTTCAGATGCAGACCATGTGGCT
GTTTTAAATCAGCACTTAGGAAGAGATTTGATTGATACGGTTTTGGTAAATGTGGCTAAGGTGCCGCAGGCTTACATGAA
TTCTAACAAATTTGATGAATACCTCGTTCAGGTTGATCACGACTTTGCTGGCCTTTGCAGGGCTGCTAAGCGTGTGATTT
CGTCTTATTTTTTACGGTTGGAGAATGGCGGAGCTTTTCACGATGGTAACTTAGTGGTGGAAGAATTAATGAATTTAGTG
AGGATAGTCAAGCAATGA

Upstream 100 bases:

>100_bases
TTGCCTTTGCCCATTGCTTGGCAGAAAGTCTGGCAACAGATTGGTCGGTTAATGAAAGCCATCGTGATCAAAATCGTCGT
AAGGAAACGGTGAATCGTTC

Downstream 100 bases:

>100_bases
GTTTTACAACCAAGGTCAAAGAGGAATTAATTCACTTGTCCACAGGTGACAACAATGAATTGGCCGCCATTATCAAATTA
TCAGGCAGCTTGGGCTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKNPKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLAMSDMPKFYERVFQYRFN
ESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHITGKIYPSSEQALTLHAVFKDGHEVAGESSIAKYQGMIDHVY
VTNTYNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKEALRQTKAEVVYICNIMTQYGETEQFSDADHVA
VLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRAAKRVISSYFLRLENGGAFHDGNLVVEELMNLV
RIVKQ

Sequences:

>Translated_325_residues
MKNPKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLAMSDMPKFYERVFQYRFN
ESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHITGKIYPSSEQALTLHAVFKDGHEVAGESSIAKYQGMIDHVY
VTNTYNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKEALRQTKAEVVYICNIMTQYGETEQFSDADHVA
VLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRAAKRVISSYFLRLENGGAFHDGNLVVEELMNLV
RIVKQ
>Mature_325_residues
MKNPKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLAMSDMPKFYERVFQYRFN
ESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHITGKIYPSSEQALTLHAVFKDGHEVAGESSIAKYQGMIDHVY
VTNTYNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIPEIKEALRQTKAEVVYICNIMTQYGETEQFSDADHVA
VLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRAAKRVISSYFLRLENGGAFHDGNLVVEELMNLV
RIVKQ

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family

Homologues:

Organism=Escherichia coli, GI1786997, Length=253, Percent_Identity=33.201581027668, Blast_Score=140, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y463_STRP3 (Q8K850)

Other databases:

- EMBL:   AE014074
- EMBL:   BA000034
- RefSeq:   NP_664267.1
- RefSeq:   NP_802654.1
- ProteinModelPortal:   Q8K850
- SMR:   Q8K850
- EnsemblBacteria:   EBSTRT00000034530
- EnsemblBacteria:   EBSTRT00000036987
- GeneID:   1008777
- GeneID:   1066604
- GenomeReviews:   AE014074_GR
- GenomeReviews:   BA000034_GR
- KEGG:   spg:SpyM3_0463
- KEGG:   sps:SPs1392
- GeneTree:   EBGT00050000028089
- HOGENOM:   HBG321904
- OMA:   FEYRFSG
- ProtClustDB:   CLSK698418
- BioCyc:   SPYO193567:SPS1392-MONOMER
- BioCyc:   SPYO198466:SPYM3_0463-MONOMER
- InterPro:   IPR002882
- InterPro:   IPR010119
- TIGRFAMs:   TIGR01826

Pfam domain/function: PF01933 UPF0052

EC number: NA

Molecular weight: Translated: 35737; Mature: 35737

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNV
CCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHH
LLAMSDMPKFYERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHIT
HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GKIYPSSEQALTLHAVFKDGHEVAGESSIAKYQGMIDHVYVTNTYNDQKPQASRKVVEAI
CEECCCCCCEEEEEEEHHCCHHHCCCHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHH
LESDMIVLGPGSLFTSILPNLVIPEIKEALRQTKAEVVYICNIMTQYGETEQFSDADHVA
HHCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCCCCHHHH
VLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRAAKRVISSYFLRL
HHHHHHCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEE
ENGGAFHDGNLVVEELMNLVRIVKQ
CCCCCEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNPKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNV
CCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHH
LLAMSDMPKFYERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHIT
HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GKIYPSSEQALTLHAVFKDGHEVAGESSIAKYQGMIDHVYVTNTYNDQKPQASRKVVEAI
CEECCCCCCEEEEEEEHHCCHHHCCCHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHH
LESDMIVLGPGSLFTSILPNLVIPEIKEALRQTKAEVVYICNIMTQYGETEQFSDADHVA
HHCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCCCCHHHH
VLNQHLGRDLIDTVLVNVAKVPQAYMNSNKFDEYLVQVDHDFAGLCRAAKRVISSYFLRL
HHHHHHCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEE
ENGGAFHDGNLVVEELMNLVRIVKQ
CCCCCEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345