| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986411
Identifier: 94986411
GI number: 94986411
Start: 2433137
End: 2434849
Strand: Reverse
Name: 94986411
Synonym: Dgeo_2314
Alternate gene names: NA
Gene position: 2434849-2433137 (Counterclockwise)
Preceding gene: 94986414
Following gene: 94986410
Centisome position: 98.69
GC content: 65.38
Gene sequence:
>1713_bases ATGACCACTGCCCTGAAGGCCGTTGAGCGCGTCTTGCACGTCCCTGACGAACAGACCCGCTGGGAAACCTACGCGCCGCG TTACGAGCAGCTTCTTCAGGCTGACCTGACGGCGGAAGGGGTGCCCGATTGGCTGGCCGAGTGGAGTGCGCTGGACGCGG AGGTGTCGCAGGCGGAGAGCAAGCTGGCCACCCATGCCGATCTGCACACGGATGACCCGGACATTCAGGCCCGCTACGCG CGGTTTCTAGAAAACGTGTCACCTCAGGCACAGCGGGCCGAGCAGGCCCTGACCAAGAAGCTGCTGGCAGTCCCCGGCTA CACTCCGGCTCCCGACTTTGCCCTGGCGTACCGCCGCTTTCGCGACGCTGCCGCCCTGTTCCGTGAAGCGAATGTCGAAC TGGGTGTCACGCACGAGGCGCAGATGAACCGTCACGGGGTGATCACGGGGAATCAGAAGGTGATCCTGAACGGCGAAGAG CGGACCGTGCCGCAGGCCAAGCAGCTTCTCGACAGCCCCGACCGGACCGAGCGTGAGGCGGCCTGGCAGGCGCTTGCCAC GAGCAACCAGGAGGTCGCCCCTGCGCTCGACGCGTTGATGCTGGAGTTGATCGGCACGCGCCAGCAGCTCGCCTGGAACG CCGACCTGCCGAGCTACCGCGACTTCATGTGGCGGCGTCTTGACCGGGTGGATTACACGCCGGGGGACTGCCGCGCCTTT CACGAGGCCGTGCGGGAAGAGGTGGTGCCCCTCGTTGCCGAGATCATGGGCGGGATCGCAGCGCGGTTGGGCCTGGAGTG CGTGCGCCCCTGGGACTACAACCGCAACAACCTGCTCGACCCGGCAGGTCGCCCGCCGCTCCAGCCCTTCAGGACAGGCG CCGAACTAGAAGAGCTTGCGCAGACTGCTTTTGAGGGGTTAGACGGCGAGCTGGCCGCGCGGTTTCGCTCCCTGCGGGCG GGCCTGCTCGACCTGGAGTCGCGGCCCGGCAAGATGACGCACGCCTACTGTCAGTACTTCCCTGTCGCGAACGAGCCCTT TGTGCTCATGAACGTGGTGGGCACCTCCGAGGACGTGCGGGTGCTCTTTCACGAGGTGGGGCACGCCTTCCACGGCTTCC TGAGTGGGGACGCGCAGCCGCTGGTCTGGAACCGCTGGAGTCCGATCGAGTTCATCGAGATTCCCTCGATGGCGATGGAG TTTCTCACGCTGGACCACCTGGGGCACGTGTTGAACCGGGAAGAACTCGCTCGCTACCGCGAGAAGCAGCTGCAGGGGGT GGTGGCTTTCCTGCCCTGGGCGGCCCAGATGGACGCCTTCCAACACTGGCTGTACGCGGAGGCTGGCCCGAATGTCACCA TCCGTGACCTTGACGCCAAGTGGCTGGAACTGGACCGGACCTTTCATCCCTTTGTGAATTGGGAGGGTCTGGACGAACGC GTGCGGGCCAAAGGCTGGCACTACTACCACATCTTCCGTGCGCCCTTCTACTACATCGAATACGCGATGTGCTCCCTCGC GGCAGTTGGGATCTGGCGGGAAGCGCGGCAGCATCCGGCGCAAGCTCTCGCCCACTACAAGGCCAGTCTGCGCCTGGGCA GCACGGTGCCGGTGCCTGAGCTGTACCGTGCCGCCGGGGTGGAGTTCCGCTTCGACCGCGAGCATATCCGGGGCTTGATG GCCTTCCTGAAAGAGCAGTTGGCGGAAGGCTGA
Upstream 100 bases:
>100_bases GAGCCGGGGGCGGAGGTGTTCACGGGGGGAGTTTAAGGGAACGCGCCGGGGGGCACAAAGTTCCAGCCCATCCTGATCAA ACGGGCGTTAGACTCGGCGC
Downstream 100 bases:
>100_bases AGGTGAGGAGGGCGGGGAAGCAGCCCGTCCTCGGCCATTTGCGTCTTGCTCCCTCTGCCACTTGGCCCATGTGCGCCAAA GGTGAGACAAGCACACTGGG
Product: peptidase M3A and M3B, thimet/oligopeptidase F
Products: NA
Alternate protein names: Oligoendopeptidase M3 Family; M3 Family Oligoendopeptidase; Peptidase M3A And M3B Thimet/Oligopeptidase F; Oligoendopeptidase; Peptidase M3 Family Protein; Oligopeptidase F; Oligopeptidase; Oligoendopeptidase M3 Family Protein; Peptidase M3B Oligoendopeptidase F; Truncated Oligoendopeptidase F; M3B Subfamily Peptidase; PepF/M3 Family Oligoendopeptidase; Peptidase M3 Oligoendopeptidase F; Oligoendopeptidase PepF/M3 Family; M3B Family Peptidase
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTTALKAVERVLHVPDEQTRWETYAPRYEQLLQADLTAEGVPDWLAEWSALDAEVSQAESKLATHADLHTDDPDIQARYA RFLENVSPQAQRAEQALTKKLLAVPGYTPAPDFALAYRRFRDAAALFREANVELGVTHEAQMNRHGVITGNQKVILNGEE RTVPQAKQLLDSPDRTEREAAWQALATSNQEVAPALDALMLELIGTRQQLAWNADLPSYRDFMWRRLDRVDYTPGDCRAF HEAVREEVVPLVAEIMGGIAARLGLECVRPWDYNRNNLLDPAGRPPLQPFRTGAELEELAQTAFEGLDGELAARFRSLRA GLLDLESRPGKMTHAYCQYFPVANEPFVLMNVVGTSEDVRVLFHEVGHAFHGFLSGDAQPLVWNRWSPIEFIEIPSMAME FLTLDHLGHVLNREELARYREKQLQGVVAFLPWAAQMDAFQHWLYAEAGPNVTIRDLDAKWLELDRTFHPFVNWEGLDER VRAKGWHYYHIFRAPFYYIEYAMCSLAAVGIWREARQHPAQALAHYKASLRLGSTVPVPELYRAAGVEFRFDREHIRGLM AFLKEQLAEG
Sequences:
>Translated_570_residues MTTALKAVERVLHVPDEQTRWETYAPRYEQLLQADLTAEGVPDWLAEWSALDAEVSQAESKLATHADLHTDDPDIQARYA RFLENVSPQAQRAEQALTKKLLAVPGYTPAPDFALAYRRFRDAAALFREANVELGVTHEAQMNRHGVITGNQKVILNGEE RTVPQAKQLLDSPDRTEREAAWQALATSNQEVAPALDALMLELIGTRQQLAWNADLPSYRDFMWRRLDRVDYTPGDCRAF HEAVREEVVPLVAEIMGGIAARLGLECVRPWDYNRNNLLDPAGRPPLQPFRTGAELEELAQTAFEGLDGELAARFRSLRA GLLDLESRPGKMTHAYCQYFPVANEPFVLMNVVGTSEDVRVLFHEVGHAFHGFLSGDAQPLVWNRWSPIEFIEIPSMAME FLTLDHLGHVLNREELARYREKQLQGVVAFLPWAAQMDAFQHWLYAEAGPNVTIRDLDAKWLELDRTFHPFVNWEGLDER VRAKGWHYYHIFRAPFYYIEYAMCSLAAVGIWREARQHPAQALAHYKASLRLGSTVPVPELYRAAGVEFRFDREHIRGLM AFLKEQLAEG >Mature_569_residues TTALKAVERVLHVPDEQTRWETYAPRYEQLLQADLTAEGVPDWLAEWSALDAEVSQAESKLATHADLHTDDPDIQARYAR FLENVSPQAQRAEQALTKKLLAVPGYTPAPDFALAYRRFRDAAALFREANVELGVTHEAQMNRHGVITGNQKVILNGEER TVPQAKQLLDSPDRTEREAAWQALATSNQEVAPALDALMLELIGTRQQLAWNADLPSYRDFMWRRLDRVDYTPGDCRAFH EAVREEVVPLVAEIMGGIAARLGLECVRPWDYNRNNLLDPAGRPPLQPFRTGAELEELAQTAFEGLDGELAARFRSLRAG LLDLESRPGKMTHAYCQYFPVANEPFVLMNVVGTSEDVRVLFHEVGHAFHGFLSGDAQPLVWNRWSPIEFIEIPSMAMEF LTLDHLGHVLNREELARYREKQLQGVVAFLPWAAQMDAFQHWLYAEAGPNVTIRDLDAKWLELDRTFHPFVNWEGLDERV RAKGWHYYHIFRAPFYYIEYAMCSLAAVGIWREARQHPAQALAHYKASLRLGSTVPVPELYRAAGVEFRFDREHIRGLMA FLKEQLAEG
Specific function: Unknown
COG id: COG1164
COG function: function code E; Oligoendopeptidase F
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64935; Mature: 64804
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALKAVERVLHVPDEQTRWETYAPRYEQLLQADLTAEGVPDWLAEWSALDAEVSQAES CCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH KLATHADLHTDDPDIQARYARFLENVSPQAQRAEQALTKKLLAVPGYTPAPDFALAYRRF HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RDAAALFREANVELGVTHEAQMNRHGVITGNQKVILNGEERTVPQAKQLLDSPDRTEREA HHHHHHHHHCCCEEECCCHHHCCCCCEEECCCEEEECCCCCCCHHHHHHHCCCCCHHHHH AWQALATSNQEVAPALDALMLELIGTRQQLAWNADLPSYRDFMWRRLDRVDYTPGDCRAF HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHH HEAVREEVVPLVAEIMGGIAARLGLECVRPWDYNRNNLLDPAGRPPLQPFRTGAELEELA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHH QTAFEGLDGELAARFRSLRAGLLDLESRPGKMTHAYCQYFPVANEPFVLMNVVGTSEDVR HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHH VLFHEVGHAFHGFLSGDAQPLVWNRWSPIEFIEIPSMAMEFLTLDHLGHVLNREELARYR HHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCHHHHHHHHHHHHHHHHHCHHHHHHHH EKQLQGVVAFLPWAAQMDAFQHWLYAEAGPNVTIRDLDAKWLELDRTFHPFVNWEGLDER HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHHH VRAKGWHYYHIFRAPFYYIEYAMCSLAAVGIWREARQHPAQALAHYKASLRLGSTVPVPE HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LYRAAGVEFRFDREHIRGLMAFLKEQLAEG HHHHCCCCEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTALKAVERVLHVPDEQTRWETYAPRYEQLLQADLTAEGVPDWLAEWSALDAEVSQAES CHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH KLATHADLHTDDPDIQARYARFLENVSPQAQRAEQALTKKLLAVPGYTPAPDFALAYRRF HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RDAAALFREANVELGVTHEAQMNRHGVITGNQKVILNGEERTVPQAKQLLDSPDRTEREA HHHHHHHHHCCCEEECCCHHHCCCCCEEECCCEEEECCCCCCCHHHHHHHCCCCCHHHHH AWQALATSNQEVAPALDALMLELIGTRQQLAWNADLPSYRDFMWRRLDRVDYTPGDCRAF HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHH HEAVREEVVPLVAEIMGGIAARLGLECVRPWDYNRNNLLDPAGRPPLQPFRTGAELEELA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHH QTAFEGLDGELAARFRSLRAGLLDLESRPGKMTHAYCQYFPVANEPFVLMNVVGTSEDVR HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHH VLFHEVGHAFHGFLSGDAQPLVWNRWSPIEFIEIPSMAMEFLTLDHLGHVLNREELARYR HHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCHHHHHHHHHHHHHHHHHCHHHHHHHH EKQLQGVVAFLPWAAQMDAFQHWLYAEAGPNVTIRDLDAKWLELDRTFHPFVNWEGLDER HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHHH VRAKGWHYYHIFRAPFYYIEYAMCSLAAVGIWREARQHPAQALAHYKASLRLGSTVPVPE HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LYRAAGVEFRFDREHIRGLMAFLKEQLAEG HHHHCCCCEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA