| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is crtP [H]
Identifier: 94986403
GI number: 94986403
Start: 2424592
End: 2426076
Strand: Reverse
Name: crtP [H]
Synonym: Dgeo_2306
Alternate gene names: 94986403
Gene position: 2426076-2424592 (Counterclockwise)
Preceding gene: 94986404
Following gene: 94986402
Centisome position: 98.33
GC content: 72.12
Gene sequence:
>1485_bases ATGAGGAGACCAGTCAAGCAGAAGGTGGAACGCGGGGCGCAGCCAAAGCGCGCTTCCCATCACGCTGCTCGCATCCCCCA CCACGTCGCCGTGATCGGTGCGGGCTTTGCGGGGCTGGCGGCGGCCCTGCGGCTTGCCGAGGCGGGCGCCCGGGTGACCG TGCTGGACCATCTGGAGCGGGCAGGCGGAAAGGCCGCGCTGGGTGAGCCGGGCTTTTCCAGCGGCCCCACCGTGGTGACG CTGCCGCAGGTGTTCCGCGCGCTGCATGGCCGGGTCGGCCTGCCCCCGCCGCCGCTGGAGGCTGCCCAGCCCACCACCAC CTATCACGACCGGAAGGGCCGGACCTTTGCTCCAGAAGCGCTCCACGTCGCCGGCAGCCTGGATGCGACGCTCGCGCAGC TCTCGCGCCGGGAGGGCCGCGACTATGTGCGGCTGCTCGCCGCCGCGCGCCGGATGTACCTGGATGCTGCGCCGACCTTC CTGTTTGGCCCGCCACCGGGCCGCCTGGCCCTGGCCCGCTACGCCCTCACGCGCGGGGGGCGGGCCGCGCCCTGGTCGAG CCTTGCGCGGTTTGTGCGGTCTGGTCCCTTTCTGACCCCCTTCTGGCTGCGCTTTGCGACCTACCTGGGAGCCGATCCCT ACCGGGCGCCCGCCGTGCTGCACAACGTGGCCTGGGTGGAACTGGGGTACGGTGTCTGGCAGCTGGAAGGGGGGCTGGCC GCCCTGGCGGTGCGGCTATGCGAGCGGGCGGAGGAACTGGGCGTGCGCTTCGAGTTCGGGACGCAGGTGCAGCAGCTCAT CACGCACGGGAACCGGGTGCTTGGCGCGCATACGAACCAGGGGGCCTTTGCCGCCGACGCCTGGGTCAGCGCCGCCGACC GCGCCCTCACGCGCCGCTGGCTGGGTCTGCCCACACAGGCCGCACCGCGCAGCCTCAGCGGTTTTGCGCTGCAACTGCAC CTCCAGGAGAACTGCGGGCAGGGGCACCATGTCTTCTGGCCCGCCGACTACGCCCGCGAGTGGCGCGACATCCGCGCTGG GCGGCTGCCGAGTGATCCCACGCTGTATCTCCATCTCCAGGGCAACCGCGCCTTCTTGCTGGTCAACGCCCCACCCGACC CCGGGGTCACCGACGACCCGCGCGGCTACGGCGCCTTTTTACTGGAACGCCTGCAGGCACGTTTTCCTCTTGCGGTGAGC GAGTGGCGCCCCCTCTCGCCCGCCGACTATGCGCGGACGGGTGTGGCTGGAGCGTTCTATGGCCGTGCGCCGCGCAGCCT GACGAGCAGCCTGCGCCCCGGCTGGACCCTGCCCCACGCGCGCAATCTGGTGCAGGTGGGCGGCACCGTCCACCCCGGCG GCGGCGTGCCGCTCGCGCTCTTGAGCGGCTGGAACGGCGCCGGAAGGTTGCTGGGGCTGCCCTACGACGACCTGGACGGC TTCTGCGTGCCGGGCGAGGGCGAAACGTGGGCGGAGCTGGGATGA
Upstream 100 bases:
>100_bases CGGAAGGGTTGCTGGGGCCGGTCACGCCGCTGCTGGCGCTGCCGGTGTATCTTCGCGCCATGCGCGGCCGGGTGAGCTGG AAGGGCCGGGAATACGACCC
Downstream 100 bases:
>100_bases AGCCCTCTATCCTGCCGGACATGACGCCGGAATCTTTTCGCACGGTCTACGGCACGGTGCAGCCGCTCGACTGGCTGTGC CTGGCCCCGCATCCCGACGA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MRRPVKQKVERGAQPKRASHHAARIPHHVAVIGAGFAGLAAALRLAEAGARVTVLDHLERAGGKAALGEPGFSSGPTVVT LPQVFRALHGRVGLPPPPLEAAQPTTTYHDRKGRTFAPEALHVAGSLDATLAQLSRREGRDYVRLLAAARRMYLDAAPTF LFGPPPGRLALARYALTRGGRAAPWSSLARFVRSGPFLTPFWLRFATYLGADPYRAPAVLHNVAWVELGYGVWQLEGGLA ALAVRLCERAEELGVRFEFGTQVQQLITHGNRVLGAHTNQGAFAADAWVSAADRALTRRWLGLPTQAAPRSLSGFALQLH LQENCGQGHHVFWPADYAREWRDIRAGRLPSDPTLYLHLQGNRAFLLVNAPPDPGVTDDPRGYGAFLLERLQARFPLAVS EWRPLSPADYARTGVAGAFYGRAPRSLTSSLRPGWTLPHARNLVQVGGTVHPGGGVPLALLSGWNGAGRLLGLPYDDLDG FCVPGEGETWAELG
Sequences:
>Translated_494_residues MRRPVKQKVERGAQPKRASHHAARIPHHVAVIGAGFAGLAAALRLAEAGARVTVLDHLERAGGKAALGEPGFSSGPTVVT LPQVFRALHGRVGLPPPPLEAAQPTTTYHDRKGRTFAPEALHVAGSLDATLAQLSRREGRDYVRLLAAARRMYLDAAPTF LFGPPPGRLALARYALTRGGRAAPWSSLARFVRSGPFLTPFWLRFATYLGADPYRAPAVLHNVAWVELGYGVWQLEGGLA ALAVRLCERAEELGVRFEFGTQVQQLITHGNRVLGAHTNQGAFAADAWVSAADRALTRRWLGLPTQAAPRSLSGFALQLH LQENCGQGHHVFWPADYAREWRDIRAGRLPSDPTLYLHLQGNRAFLLVNAPPDPGVTDDPRGYGAFLLERLQARFPLAVS EWRPLSPADYARTGVAGAFYGRAPRSLTSSLRPGWTLPHARNLVQVGGTVHPGGGVPLALLSGWNGAGRLLGLPYDDLDG FCVPGEGETWAELG >Mature_494_residues MRRPVKQKVERGAQPKRASHHAARIPHHVAVIGAGFAGLAAALRLAEAGARVTVLDHLERAGGKAALGEPGFSSGPTVVT LPQVFRALHGRVGLPPPPLEAAQPTTTYHDRKGRTFAPEALHVAGSLDATLAQLSRREGRDYVRLLAAARRMYLDAAPTF LFGPPPGRLALARYALTRGGRAAPWSSLARFVRSGPFLTPFWLRFATYLGADPYRAPAVLHNVAWVELGYGVWQLEGGLA ALAVRLCERAEELGVRFEFGTQVQQLITHGNRVLGAHTNQGAFAADAWVSAADRALTRRWLGLPTQAAPRSLSGFALQLH LQENCGQGHHVFWPADYAREWRDIRAGRLPSDPTLYLHLQGNRAFLLVNAPPDPGVTDDPRGYGAFLLERLQARFPLAVS EWRPLSPADYARTGVAGAFYGRAPRSLTSSLRPGWTLPHARNLVQVGGTVHPGGGVPLALLSGWNGAGRLLGLPYDDLDG FCVPGEGETWAELG
Specific function: Catalyzes the oxidation of the terminal methyl side group of 4,4'-diaponeurosporene to form 4,4'-diaponeurosporenoate (4,4'-diaponeurosporenic acid), via the aldehyde intermediate 4,4'-diaponeurosporenal. This is an intermediate step in the biosynthesis o
COG id: COG1233
COG function: function code Q; Phytoene dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtP subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002937 - InterPro: IPR014105 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: NA
Molecular weight: Translated: 53318; Mature: 53318
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPVKQKVERGAQPKRASHHAARIPHHVAVIGAGFAGLAAALRLAEAGARVTVLDHLER CCCCHHHHHHCCCCCCHHCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEHHHHHHHH AGGKAALGEPGFSSGPTVVTLPQVFRALHGRVGLPPPPLEAAQPTTTYHDRKGRTFAPEA CCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEECCHH LHVAGSLDATLAQLSRREGRDYVRLLAAARRMYLDAAPTFLFGPPPGRLALARYALTRGG HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC RAAPWSSLARFVRSGPFLTPFWLRFATYLGADPYRAPAVLHNVAWVELGYGVWQLEGGLA CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCEEEECCCHH ALAVRLCERAEELGVRFEFGTQVQQLITHGNRVLGAHTNQGAFAADAWVSAADRALTRRW HHHHHHHHHHHHCCCEEECHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH LGLPTQAAPRSLSGFALQLHLQENCGQGHHVFWPADYAREWRDIRAGRLPSDPTLYLHLQ HCCCCCCCCCCCCCEEEEEEEHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCEEEEEEE GNRAFLLVNAPPDPGVTDDPRGYGAFLLERLQARFPLAVSEWRPLSPADYARTGVAGAFY CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEHHCCCCCCCHHHHHHCCCHHHH GRAPRSLTSSLRPGWTLPHARNLVQVGGTVHPGGGVPLALLSGWNGAGRLLGLPYDDLDG CCCCHHHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCEEEEECCCCCCCEECCCCCCCCC FCVPGEGETWAELG EEECCCCCCHHCCC >Mature Secondary Structure MRRPVKQKVERGAQPKRASHHAARIPHHVAVIGAGFAGLAAALRLAEAGARVTVLDHLER CCCCHHHHHHCCCCCCHHCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEHHHHHHHH AGGKAALGEPGFSSGPTVVTLPQVFRALHGRVGLPPPPLEAAQPTTTYHDRKGRTFAPEA CCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEECCHH LHVAGSLDATLAQLSRREGRDYVRLLAAARRMYLDAAPTFLFGPPPGRLALARYALTRGG HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC RAAPWSSLARFVRSGPFLTPFWLRFATYLGADPYRAPAVLHNVAWVELGYGVWQLEGGLA CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCEEEECCCHH ALAVRLCERAEELGVRFEFGTQVQQLITHGNRVLGAHTNQGAFAADAWVSAADRALTRRW HHHHHHHHHHHHCCCEEECHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH LGLPTQAAPRSLSGFALQLHLQENCGQGHHVFWPADYAREWRDIRAGRLPSDPTLYLHLQ HCCCCCCCCCCCCCEEEEEEEHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCEEEEEEE GNRAFLLVNAPPDPGVTDDPRGYGAFLLERLQARFPLAVSEWRPLSPADYARTGVAGAFY CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEHHCCCCCCCHHHHHHCCCHHHH GRAPRSLTSSLRPGWTLPHARNLVQVGGTVHPGGGVPLALLSGWNGAGRLLGLPYDDLDG CCCCHHHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCEEEEECCCCCCCEECCCCCCCCC FCVPGEGETWAELG EEECCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA