| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986232
Identifier: 94986232
GI number: 94986232
Start: 2244765
End: 2245670
Strand: Reverse
Name: 94986232
Synonym: Dgeo_2133
Alternate gene names: NA
Gene position: 2245670-2244765 (Counterclockwise)
Preceding gene: 94986233
Following gene: 94986231
Centisome position: 91.02
GC content: 71.41
Gene sequence:
>906_bases ATGCAGAACCTCACCCTCACCGCCATTCCCGGCTTTCGCGTCGGCCACTGGACCGATTCGGTGGGTCTGACCGGCTGCAC CGTGATCCTCTGCCCCGATGCGGGTGCAGTGGCCTCCGCGTCCTTCCTGGGGCCGAGTCCCGGCACCCGCGAGGGCATCC TGCTTGCTCCTGAGAAGAAGGTGGAACGCATTCACGCCCTGTTGTTGACGGGCGGCAGCGCCTTTGGCCTCGCCGCAGCG GCGGGCGTCGTGCGTGTGCTGGAGGAACGTGGCCTGGGGCACGCGACACCCTGGGCGCGCGTGCCCCTTGTCCCGGCGGC GGTGATCTATGACCTGGGCGTGGGTGACCCCCGGGCGCGTCCCGGCGAGCGGGAAGGCGAGCTGGCCGCGCGGGCAGCCT CCGGCGACCCGGTGGCGCGCGGCCGGGTGGGTGCGGGGACCGGTGCGACGGCGGGTAAGTATCTAGGCAGCGGCGCGGTG CCCGGTGGCCTGGGCAGCGTCTGCCTGGAGCGGCACGGGGTCCGCGTGGGTGCGCTGGCGGTGGTCAATCCCATCGGGGA CGTGCTCGACGAATCCGGCAACGTGCTGGCCGGTCCGGGCGTGGGACCGGGAGCGGCGGCCTTCACGCCGGGTGAGCTGG AAAGCACCACGTTGGTCGCTGTCGCCACCGAACATGCCCTCACCAAAACCGATGCCCGCCGCCTGGCCGATGCGGCTCAA ACCGCCCTGGGCCGCGTGATCGCCCCTAGCCATACCTTCTGGGACGGTGACAGTACCTTTGTGCTCAGCAGTTGTGCCCT GCCCCCTGCCGATCCCCTGCTGCTCGGCGCACTGGTGCAGGAGGCCGTCTGCGCAGCGGTGCGGGACGCGGTGCGGATGG CCAATGGCCTGACCCCCTCCACGTGA
Upstream 100 bases:
>100_bases GCCTGCGGCGCTCCCGCCGACCTAGCCAGCTCTTTTCTCGTCGTCCGGTTGCTTTCCGAGCAGCTCCTGACTCGCGCCTG CTGTGTGATCCGGAGGCCTG
Downstream 100 bases:
>100_bases GGGTCTGCCGTTCGCCCGTTTTCCTTTCGGCTGAATGAACCCCGGTCATGCTCCCCGCCTCGGCGCAGCGGTTACCCTGC CCGCGAGTCCGCTTCCCCGC
Product: peptidase S58, DmpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKKVERIHALLLTGGSAFGLAAA AGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRARPGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAV PGGLGSVCLERHGVRVGALAVVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPST
Sequences:
>Translated_301_residues MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKKVERIHALLLTGGSAFGLAAA AGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRARPGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAV PGGLGSVCLERHGVRVGALAVVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPST >Mature_301_residues MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKKVERIHALLLTGGSAFGLAAA AGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRARPGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAV PGGLGSVCLERHGVRVGALAVVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPST
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 30073; Mature: 30073
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKK CCCCEEEECCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEECCHHH VERIHALLLTGGSAFGLAAAAGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRAR HHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCCCCC PGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAVPGGLGSVCLERHGVRVGALA CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEEHHH VVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPS HHHHHEECCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC T C >Mature Secondary Structure MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKK CCCCEEEECCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEECCHHH VERIHALLLTGGSAFGLAAAAGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRAR HHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCCCCC PGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAVPGGLGSVCLERHGVRVGALA CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEEHHH VVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPS HHHHHEECCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]