Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94986232

Identifier: 94986232

GI number: 94986232

Start: 2244765

End: 2245670

Strand: Reverse

Name: 94986232

Synonym: Dgeo_2133

Alternate gene names: NA

Gene position: 2245670-2244765 (Counterclockwise)

Preceding gene: 94986233

Following gene: 94986231

Centisome position: 91.02

GC content: 71.41

Gene sequence:

>906_bases
ATGCAGAACCTCACCCTCACCGCCATTCCCGGCTTTCGCGTCGGCCACTGGACCGATTCGGTGGGTCTGACCGGCTGCAC
CGTGATCCTCTGCCCCGATGCGGGTGCAGTGGCCTCCGCGTCCTTCCTGGGGCCGAGTCCCGGCACCCGCGAGGGCATCC
TGCTTGCTCCTGAGAAGAAGGTGGAACGCATTCACGCCCTGTTGTTGACGGGCGGCAGCGCCTTTGGCCTCGCCGCAGCG
GCGGGCGTCGTGCGTGTGCTGGAGGAACGTGGCCTGGGGCACGCGACACCCTGGGCGCGCGTGCCCCTTGTCCCGGCGGC
GGTGATCTATGACCTGGGCGTGGGTGACCCCCGGGCGCGTCCCGGCGAGCGGGAAGGCGAGCTGGCCGCGCGGGCAGCCT
CCGGCGACCCGGTGGCGCGCGGCCGGGTGGGTGCGGGGACCGGTGCGACGGCGGGTAAGTATCTAGGCAGCGGCGCGGTG
CCCGGTGGCCTGGGCAGCGTCTGCCTGGAGCGGCACGGGGTCCGCGTGGGTGCGCTGGCGGTGGTCAATCCCATCGGGGA
CGTGCTCGACGAATCCGGCAACGTGCTGGCCGGTCCGGGCGTGGGACCGGGAGCGGCGGCCTTCACGCCGGGTGAGCTGG
AAAGCACCACGTTGGTCGCTGTCGCCACCGAACATGCCCTCACCAAAACCGATGCCCGCCGCCTGGCCGATGCGGCTCAA
ACCGCCCTGGGCCGCGTGATCGCCCCTAGCCATACCTTCTGGGACGGTGACAGTACCTTTGTGCTCAGCAGTTGTGCCCT
GCCCCCTGCCGATCCCCTGCTGCTCGGCGCACTGGTGCAGGAGGCCGTCTGCGCAGCGGTGCGGGACGCGGTGCGGATGG
CCAATGGCCTGACCCCCTCCACGTGA

Upstream 100 bases:

>100_bases
GCCTGCGGCGCTCCCGCCGACCTAGCCAGCTCTTTTCTCGTCGTCCGGTTGCTTTCCGAGCAGCTCCTGACTCGCGCCTG
CTGTGTGATCCGGAGGCCTG

Downstream 100 bases:

>100_bases
GGGTCTGCCGTTCGCCCGTTTTCCTTTCGGCTGAATGAACCCCGGTCATGCTCCCCGCCTCGGCGCAGCGGTTACCCTGC
CCGCGAGTCCGCTTCCCCGC

Product: peptidase S58, DmpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKKVERIHALLLTGGSAFGLAAA
AGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRARPGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAV
PGGLGSVCLERHGVRVGALAVVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ
TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPST

Sequences:

>Translated_301_residues
MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKKVERIHALLLTGGSAFGLAAA
AGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRARPGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAV
PGGLGSVCLERHGVRVGALAVVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ
TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPST
>Mature_301_residues
MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKKVERIHALLLTGGSAFGLAAA
AGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRARPGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAV
PGGLGSVCLERHGVRVGALAVVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ
TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPST

Specific function: Unknown

COG id: COG3191

COG function: function code EQ; L-aminopeptidase/D-esterase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1333 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016117
- InterPro:   IPR005321 [H]

Pfam domain/function: PF03576 Peptidase_S58 [H]

EC number: NA

Molecular weight: Translated: 30073; Mature: 30073

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKK
CCCCEEEECCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEECCHHH
VERIHALLLTGGSAFGLAAAAGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRAR
HHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCCCCC
PGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAVPGGLGSVCLERHGVRVGALA
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEEHHH
VVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ
HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPS
HHHHHEECCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T
C
>Mature Secondary Structure
MQNLTLTAIPGFRVGHWTDSVGLTGCTVILCPDAGAVASASFLGPSPGTREGILLAPEKK
CCCCEEEECCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEECCHHH
VERIHALLLTGGSAFGLAAAAGVVRVLEERGLGHATPWARVPLVPAAVIYDLGVGDPRAR
HHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCCCCC
PGEREGELAARAASGDPVARGRVGAGTGATAGKYLGSGAVPGGLGSVCLERHGVRVGALA
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEEHHH
VVNPIGDVLDESGNVLAGPGVGPGAAAFTPGELESTTLVAVATEHALTKTDARRLADAAQ
HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
TALGRVIAPSHTFWDGDSTFVLSSCALPPADPLLLGALVQEAVCAAVRDAVRMANGLTPS
HHHHHEECCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]