| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is hemA [H]
Identifier: 94986227
GI number: 94986227
Start: 2240116
End: 2241213
Strand: Reverse
Name: hemA [H]
Synonym: Dgeo_2128
Alternate gene names: 94986227
Gene position: 2241213-2240116 (Counterclockwise)
Preceding gene: 94986228
Following gene: 94986226
Centisome position: 90.84
GC content: 69.76
Gene sequence:
>1098_bases GTGACCCTGACGTGCCCGACCGCCCGCGCCTTCCTGGCCCAGCCGCAGGTGCCGCCCCTCGCTCCGCTGGATTTTGCCGT GATTGGCCTGAACCACCAGACCGCCCCGGTTGAGGTGCGGGAACAGGCCGCAGTGCGTGCTGGAGACGAAGGGAAAGTGC TCCAGCACCTCTCCCGCTATGCCCGCGAGGTGATGCTGCTCAACACCTGCAACCGCACCGAGGTCTACCTGGCGGGGCTG CAGGGCGACCCGCTGCGCGCCTTTGAGAGTGGTTGGGGCCGGGCGCTGGACGGCCACCTGTATGTTCACCGGGGTGAGGC TGCCGCCACGCATCTCTACCGCGTCGCGGCGGGGCTGGACAGCCTGGTGATCGGGGAGACCCAGATCCAGGGGCAGGTGA AGCGGGCCTGGCAGGAGGCGCACGCCCGCGGCCTTTCTGGCACCCTGCTGAACAAGGTGGCGCAGGGGGCCTTGGCTGCC GGGAAGCGTGTCCGCAGTGAAACCGGCCTCAGTGACAAGGTGGTCAGCGTATCGAGCGCCGCCGTTGAACTCGCCGAGGC CGCCCTGGGTGAGCTCAGGCACCGCACGGCCCTGATTCTGGGCGCGGGTGAGACGGCCGAACTCACCCTCACGCACCTGC GGGCAGCGGGCGTGCAGGACGTGATCGTGGTCAACCGCACCGAGGCGCGGGCTCGGCAGCTTGCAGATAAGCTGGGGGGC CGAGCCTGCGCGGCCGAGTACCTCCACGAGGTTTTGCCCGAGGCGGACGTGGTGATTGCCTCCAGCGCGGCCCCCCACTA TGTCCTGCATGGCGAGGGCGTGCGCGCGGCGCTGGCAAAGCGCCCGGAGCGCCCCATCTTCCTGATCGACATCAGCGTGC CGCGCATTCTCGATCCCGATATCCGTGCGGTGTCCGGTGCCCACCTCTACAACCTCGATGACCTCACCGCGATTGTCAGC CGCAACCTGCAAAGCCGCCGCGCGGCCCTGCCGTACGCCGAGGCGATTATCCGCGAGGCGGTGGCCGACCTGCTGCGCTG GCACCTGACCCGCGAGGCGCAGCTGGGACGGCGCGCGGTCGCGTTGGCCAGCGACTGA
Upstream 100 bases:
>100_bases GGGCGCTCACCCTGGACCCTGCCGCACGCGAAGACGCACTGGCGGGCTTGCGTGCCGAGATCCGTACGGCGCTGGGTCTG CCCGCTCTGGGGGGGGCCGC
Downstream 100 bases:
>100_bases GGAGAGTTCCTGCGTACCGCGCACCACCAACGGCTCTCCCTTTTTCCCGTACCCTGCCCCTCATGTGGACCCGCATTCCT TCCAGCGCCCTGCGGCTCAC
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MTLTCPTARAFLAQPQVPPLAPLDFAVIGLNHQTAPVEVREQAAVRAGDEGKVLQHLSRYAREVMLLNTCNRTEVYLAGL QGDPLRAFESGWGRALDGHLYVHRGEAAATHLYRVAAGLDSLVIGETQIQGQVKRAWQEAHARGLSGTLLNKVAQGALAA GKRVRSETGLSDKVVSVSSAAVELAEAALGELRHRTALILGAGETAELTLTHLRAAGVQDVIVVNRTEARARQLADKLGG RACAAEYLHEVLPEADVVIASSAAPHYVLHGEGVRAALAKRPERPIFLIDISVPRILDPDIRAVSGAHLYNLDDLTAIVS RNLQSRRAALPYAEAIIREAVADLLRWHLTREAQLGRRAVALASD
Sequences:
>Translated_365_residues MTLTCPTARAFLAQPQVPPLAPLDFAVIGLNHQTAPVEVREQAAVRAGDEGKVLQHLSRYAREVMLLNTCNRTEVYLAGL QGDPLRAFESGWGRALDGHLYVHRGEAAATHLYRVAAGLDSLVIGETQIQGQVKRAWQEAHARGLSGTLLNKVAQGALAA GKRVRSETGLSDKVVSVSSAAVELAEAALGELRHRTALILGAGETAELTLTHLRAAGVQDVIVVNRTEARARQLADKLGG RACAAEYLHEVLPEADVVIASSAAPHYVLHGEGVRAALAKRPERPIFLIDISVPRILDPDIRAVSGAHLYNLDDLTAIVS RNLQSRRAALPYAEAIIREAVADLLRWHLTREAQLGRRAVALASD >Mature_364_residues TLTCPTARAFLAQPQVPPLAPLDFAVIGLNHQTAPVEVREQAAVRAGDEGKVLQHLSRYAREVMLLNTCNRTEVYLAGLQ GDPLRAFESGWGRALDGHLYVHRGEAAATHLYRVAAGLDSLVIGETQIQGQVKRAWQEAHARGLSGTLLNKVAQGALAAG KRVRSETGLSDKVVSVSSAAVELAEAALGELRHRTALILGAGETAELTLTHLRAAGVQDVIVVNRTEARARQLADKLGGR ACAAEYLHEVLPEADVVIASSAAPHYVLHGEGVRAALAKRPERPIFLIDISVPRILDPDIRAVSGAHLYNLDDLTAIVSR NLQSRRAALPYAEAIIREAVADLLRWHLTREAQLGRRAVALASD
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=330, Percent_Identity=38.4848484848485, Blast_Score=213, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 39230; Mature: 39099
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTCPTARAFLAQPQVPPLAPLDFAVIGLNHQTAPVEVREQAAVRAGDEGKVLQHLSRY CEECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH AREVMLLNTCNRTEVYLAGLQGDPLRAFESGWGRALDGHLYVHRGEAAATHLYRVAAGLD HHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHCCC SLVIGETQIQGQVKRAWQEAHARGLSGTLLNKVAQGALAAGKRVRSETGLSDKVVSVSSA CEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVELAEAALGELRHRTALILGAGETAELTLTHLRAAGVQDVIVVNRTEARARQLADKLGG HHHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCC RACAAEYLHEVLPEADVVIASSAAPHYVLHGEGVRAALAKRPERPIFLIDISVPRILDPD HHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCCC IRAVSGAHLYNLDDLTAIVSRNLQSRRAALPYAEAIIREAVADLLRWHLTREAQLGRRAV HHHCCCCEEECHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE ALASD EECCC >Mature Secondary Structure TLTCPTARAFLAQPQVPPLAPLDFAVIGLNHQTAPVEVREQAAVRAGDEGKVLQHLSRY EECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH AREVMLLNTCNRTEVYLAGLQGDPLRAFESGWGRALDGHLYVHRGEAAATHLYRVAAGLD HHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHCCC SLVIGETQIQGQVKRAWQEAHARGLSGTLLNKVAQGALAAGKRVRSETGLSDKVVSVSSA CEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVELAEAALGELRHRTALILGAGETAELTLTHLRAAGVQDVIVVNRTEARARQLADKLGG HHHHHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCC RACAAEYLHEVLPEADVVIASSAAPHYVLHGEGVRAALAKRPERPIFLIDISVPRILDPD HHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCCC IRAVSGAHLYNLDDLTAIVSRNLQSRRAALPYAEAIIREAVADLLRWHLTREAQLGRRAV HHHCCCCEEECHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE ALASD EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA