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The map label for this gene is ypfJ [H]

Identifier: 94986214

GI number: 94986214

Start: 2223963

End: 2224820

Strand: Reverse

Name: ypfJ [H]

Synonym: Dgeo_2115

Alternate gene names: 94986214

Gene position: 2224820-2223963 (Counterclockwise)

Preceding gene: 94986215

Following gene: 94986213

Centisome position: 90.18

GC content: 63.64

Gene sequence:

>858_bases
ATGGACTGGCAGAATCTTCCCGAGGGAGGGAATATCGAGGATCGCCGGGGCGGGGGACTGCCCGGCGGCGGGATCGCGGT
GGGAGGGGTGGGTGGCTTGATCATCGCCCTCATTGCTCTGTTCTTTGGGATCGATCCCAGTGCGATCCTGGGTGGCGGAC
AGAGCAGCGCGCCCGCCCAGACCCAGCCGCGGACGGCACCTGGCCAGCAAGACACCTCCTATCAGTTTGTAGACCGGATT
CTCGCGAGCACCAACCAGGTCTGGTCGGACATCTTCCGACAGGCGGGCCGCAGCTATCATGACCCGACGCTGGTGTTGTA
CAGCGGCTACACCACCAGTGCCTGCGGGCAGGCCAGCAGCGCCGTCGGCCCCTTCTACTGCCCCCTTGACCAGAAAGTTT
ATCTAGATACCAGCTTCTTTAACGAGATGGACCGGCGGCTGGGGGGCGGCGGTGATTTTGCCTACGCCTATGTGATCGCG
CATGAGGTCGGACATCACGTGCAGGATGAACTCGGCATCGCCGATCAGGTCACACGGGCCCAGCAGCGGGCGCGCACGGA
GGCCGAGGCCAACAGCTTGAGCGTGCGTCTGGAACTTCAAGCCGACTGCTTCGCGGGGGTGTGGGGTCACCATGTGTCCA
GCCTTGCCAACCTCACCCAGCAGGATGTCCGCGAGGCTGTCAACACTGCTGCAGCCATCGGGGACGATACCCTCCAGCGC
CAGAGCCAGGGCTACGTAGTGCCCGATTCCTTCACGCACGGCACCAGCCAGCAGCGGGTGAACTGGTTCATGACCGGCTT
CAAGAGCGGCAATCCCAACAGCTGCGACACCTTCGGTCAGAACTCCGGCCAGCTCTGA

Upstream 100 bases:

>100_bases
GCAGCTTCGCTCAAGGCCGCGTCAGACCGGCGCTCCTAGAATGCGGGCAATAGAGGCAGCAACACGGCCCGGTACGTCCG
GCCAGACGAGGAGTGAGGAT

Downstream 100 bases:

>100_bases
GGCGGACCCTCACCCGTCCTGTGCGATCCTGCGCTGTGCGCTAATGCGGGCATGCCCGCCCCGCTCCACCCCCGACGGTC
TAGTGAGATCGGGGGTGGTC

Product: protein of unknown function, zinc metallopeptidase putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDWQNLPEGGNIEDRRGGGLPGGGIAVGGVGGLIIALIALFFGIDPSAILGGGQSSAPAQTQPRTAPGQQDTSYQFVDRI
LASTNQVWSDIFRQAGRSYHDPTLVLYSGYTTSACGQASSAVGPFYCPLDQKVYLDTSFFNEMDRRLGGGGDFAYAYVIA
HEVGHHVQDELGIADQVTRAQQRARTEAEANSLSVRLELQADCFAGVWGHHVSSLANLTQQDVREAVNTAAAIGDDTLQR
QSQGYVVPDSFTHGTSQQRVNWFMTGFKSGNPNSCDTFGQNSGQL

Sequences:

>Translated_285_residues
MDWQNLPEGGNIEDRRGGGLPGGGIAVGGVGGLIIALIALFFGIDPSAILGGGQSSAPAQTQPRTAPGQQDTSYQFVDRI
LASTNQVWSDIFRQAGRSYHDPTLVLYSGYTTSACGQASSAVGPFYCPLDQKVYLDTSFFNEMDRRLGGGGDFAYAYVIA
HEVGHHVQDELGIADQVTRAQQRARTEAEANSLSVRLELQADCFAGVWGHHVSSLANLTQQDVREAVNTAAAIGDDTLQR
QSQGYVVPDSFTHGTSQQRVNWFMTGFKSGNPNSCDTFGQNSGQL
>Mature_285_residues
MDWQNLPEGGNIEDRRGGGLPGGGIAVGGVGGLIIALIALFFGIDPSAILGGGQSSAPAQTQPRTAPGQQDTSYQFVDRI
LASTNQVWSDIFRQAGRSYHDPTLVLYSGYTTSACGQASSAVGPFYCPLDQKVYLDTSFFNEMDRRLGGGGDFAYAYVIA
HEVGHHVQDELGIADQVTRAQQRARTEAEANSLSVRLELQADCFAGVWGHHVSSLANLTQQDVREAVNTAAAIGDDTLQR
QSQGYVVPDSFTHGTSQQRVNWFMTGFKSGNPNSCDTFGQNSGQL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=292, Percent_Identity=48.972602739726, Blast_Score=278, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 30498; Mature: 30498

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWQNLPEGGNIEDRRGGGLPGGGIAVGGVGGLIIALIALFFGIDPSAILGGGQSSAPAQ
CCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
TQPRTAPGQQDTSYQFVDRILASTNQVWSDIFRQAGRSYHDPTLVLYSGYTTSACGQASS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCC
AVGPFYCPLDQKVYLDTSFFNEMDRRLGGGGDFAYAYVIAHEVGHHVQDELGIADQVTRA
CCCCEECCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
QQRARTEAEANSLSVRLELQADCFAGVWGHHVSSLANLTQQDVREAVNTAAAIGDDTLQR
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QSQGYVVPDSFTHGTSQQRVNWFMTGFKSGNPNSCDTFGQNSGQL
CCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDWQNLPEGGNIEDRRGGGLPGGGIAVGGVGGLIIALIALFFGIDPSAILGGGQSSAPAQ
CCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
TQPRTAPGQQDTSYQFVDRILASTNQVWSDIFRQAGRSYHDPTLVLYSGYTTSACGQASS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCC
AVGPFYCPLDQKVYLDTSFFNEMDRRLGGGGDFAYAYVIAHEVGHHVQDELGIADQVTRA
CCCCEECCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
QQRARTEAEANSLSVRLELQADCFAGVWGHHVSSLANLTQQDVREAVNTAAAIGDDTLQR
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QSQGYVVPDSFTHGTSQQRVNWFMTGFKSGNPNSCDTFGQNSGQL
CCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]