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The map label for this gene is 94986119

Identifier: 94986119

GI number: 94986119

Start: 2130860

End: 2131648

Strand: Reverse

Name: 94986119

Synonym: Dgeo_2020

Alternate gene names: NA

Gene position: 2131648-2130860 (Counterclockwise)

Preceding gene: 94986123

Following gene: 94986118

Centisome position: 86.4

GC content: 69.2

Gene sequence:

>789_bases
ATGGGCGTCAGTGTACGGCAGCGGCTCGGGAAGTCGTCCGCCTGCAGGGCTCAGGCTCGCGGCCGCTCCGAACGCTATCT
TGCTCCCATGAAGCAGAAGCTCCCCACCCTGGTGGCGCAGGCGCGCGGTGGGCGCGTTGTCCGCACGCCCTTCCTGGACG
GCGACGACCTCGACCGCCGCACCTTGCAGGACGACGAGGTGCGTTCGGTCTTGGCCGGCGGCTTTCCCGACGCGCGCCGG
GTGGTGTTGACCCTCTATCCCGCTCACATCCCCGAGGTGGACAGCGGCGTGACGGTGCTGCGCGTGACTCCGGCACCCGG
CGGTCCTGCCTGGGACCTGCAGGACTTCAGCGTGCAGCTGCGCCGCCTGAATCTGCCCGAGGACCAGCTCGGCGACGTGC
GCGAGGAGCGCGGCGGTTCCTTTCTGGTAGCCACGACGGGCAAGGCCGCCCAGATCCTCGCGGACCTGACCGAGCTGGGG
GGCCGCGCGGTGGCGGTGGAGGTTGTCGGGGAGACGGCGGGGCGCGGCAGCAAGACCCGCGAGGTTGTGGTGCCCTCCCT
GCGGGTGGATGTGGTGGGGGCCAAGGGCTTTGGTATCAGCCGCGCCTACTTCCAGCAGGGCATCGACGGCGGCAAGGTGA
GGCTCAATGGCCAGCCCGCCCGCGCCAGCTCGGAAATCCGCGAGGGCGACAGCCTCAGCGCTGAGGGCTTGGGCCGAATT
GATTTTAAGCGCGTGGTGAACGAGACGCGGCGCGGGAATTTCAAGGTTGAATTGGAGGTTCACCGGTGA

Upstream 100 bases:

>100_bases
CGGCGCCTCAATCTTCTCCAGATGTGCGAGGACGGCCTGCAACGTTTCCAGCGGTGCTCCTGGAACGCCGAACGGCTCAG
CGATGTGTATGGGCGTCTGC

Downstream 100 bases:

>100_bases
AGGGCCGCGCGCCGGCTCGGGCTGGTGTGCTGCTCCGCATTCGTGGCCTACGGCGGACGGCTTGCCCCCATGATTGACCT
GCTCGCGCGCAACCCCAGTC

Product: RNA-binding S4

Products: NA

Alternate protein names: S4 Domain-Containing Protein

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MGVSVRQRLGKSSACRAQARGRSERYLAPMKQKLPTLVAQARGGRVVRTPFLDGDDLDRRTLQDDEVRSVLAGGFPDARR
VVLTLYPAHIPEVDSGVTVLRVTPAPGGPAWDLQDFSVQLRRLNLPEDQLGDVREERGGSFLVATTGKAAQILADLTELG
GRAVAVEVVGETAGRGSKTREVVVPSLRVDVVGAKGFGISRAYFQQGIDGGKVRLNGQPARASSEIREGDSLSAEGLGRI
DFKRVVNETRRGNFKVELEVHR

Sequences:

>Translated_262_residues
MGVSVRQRLGKSSACRAQARGRSERYLAPMKQKLPTLVAQARGGRVVRTPFLDGDDLDRRTLQDDEVRSVLAGGFPDARR
VVLTLYPAHIPEVDSGVTVLRVTPAPGGPAWDLQDFSVQLRRLNLPEDQLGDVREERGGSFLVATTGKAAQILADLTELG
GRAVAVEVVGETAGRGSKTREVVVPSLRVDVVGAKGFGISRAYFQQGIDGGKVRLNGQPARASSEIREGDSLSAEGLGRI
DFKRVVNETRRGNFKVELEVHR
>Mature_261_residues
GVSVRQRLGKSSACRAQARGRSERYLAPMKQKLPTLVAQARGGRVVRTPFLDGDDLDRRTLQDDEVRSVLAGGFPDARRV
VLTLYPAHIPEVDSGVTVLRVTPAPGGPAWDLQDFSVQLRRLNLPEDQLGDVREERGGSFLVATTGKAAQILADLTELGG
RAVAVEVVGETAGRGSKTREVVVPSLRVDVVGAKGFGISRAYFQQGIDGGKVRLNGQPARASSEIREGDSLSAEGLGRID
FKRVVNETRRGNFKVELEVHR

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28349; Mature: 28217

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSVRQRLGKSSACRAQARGRSERYLAPMKQKLPTLVAQARGGRVVRTPFLDGDDLDRR
CCCCHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
TLQDDEVRSVLAGGFPDARRVVLTLYPAHIPEVDSGVTVLRVTPAPGGPAWDLQDFSVQL
CCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH
RRLNLPEDQLGDVREERGGSFLVATTGKAAQILADLTELGGRAVAVEVVGETAGRGSKTR
EECCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC
EVVVPSLRVDVVGAKGFGISRAYFQQGIDGGKVRLNGQPARASSEIREGDSLSAEGLGRI
EEEECEEEEEEEECCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCH
DFKRVVNETRRGNFKVELEVHR
HHHHHHHHHHCCCEEEEEEEEC
>Mature Secondary Structure 
GVSVRQRLGKSSACRAQARGRSERYLAPMKQKLPTLVAQARGGRVVRTPFLDGDDLDRR
CCCHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
TLQDDEVRSVLAGGFPDARRVVLTLYPAHIPEVDSGVTVLRVTPAPGGPAWDLQDFSVQL
CCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH
RRLNLPEDQLGDVREERGGSFLVATTGKAAQILADLTELGGRAVAVEVVGETAGRGSKTR
EECCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC
EVVVPSLRVDVVGAKGFGISRAYFQQGIDGGKVRLNGQPARASSEIREGDSLSAEGLGRI
EEEECEEEEEEEECCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCH
DFKRVVNETRRGNFKVELEVHR
HHHHHHHHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA