| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986039
Identifier: 94986039
GI number: 94986039
Start: 2041937
End: 2043340
Strand: Reverse
Name: 94986039
Synonym: Dgeo_1940
Alternate gene names: NA
Gene position: 2043340-2041937 (Counterclockwise)
Preceding gene: 94986043
Following gene: 94986034
Centisome position: 82.82
GC content: 67.52
Gene sequence:
>1404_bases ATGGCTGGTCTGGCGACCCGTTTGCGCACCCGTCCGGTTCTTGCCCTCACCCTGCTGGCCTGTGGCCTCGCGCTGGGCAG TTGTGGCCTGTTGTCGCCGCCTGCCGCTGAGACGCGTCCCCAGGACACCCGCACCTTCAAGCCAGTCGAACCTGCGACCA CGGCCCTGGCTGGAGCAACCCTCTACAAGGGCACCTATGCGGGCCTCCACGGTCCGGCGAGCTACCTGATCGAGGTGCCG GACAACTGGAACGGCACGCTGGTGATGTATGCGCACGGCTACCGTGGCACCGGGGAGAACCTGACGGTCGATCCACCCGC CATCCGCCCGTACCTGATTGCCCAGGGGTACGCCTGGGCCGCCAGCAGCTACTCGGCGAACTATTACGACGTGCGGGCGG GAGTGGAGGACACCAACGCGCTGGCGCTGGCCTTTGGCAAGCTGACGGGCGGGAAGTACCCCGCGCCCAGCAAGTATCTG ATCATGGGCGTCTCGATGGGCGGGCATATCGCCGGGGCCGCTGTGGAGAAGGAGACCCTCGCCACCGAGCAGAACAAGGT GAACTATGCGGCGTCCCTGCCCCTTTGCGGCGTGTTGGACGAGACATACGAGTTCCAGTGGTTGGGAGACTACACGCTGG TCGCCGCGCAGCTCGCCGGACTGGGCGCCCGGACCTACCCCCAGAAGGATTACCCAGCCATCCTGCCCGACATCAAGGCG GCGCTCTTTACCGACACGTCCGGCCCGCTGTGGCAGGAGAACGCCGGGCAGGGCGCGAAGCTGCGCGAGATCGCCCGCCG CCTCACCGGTGGTGACCGCCCGGTTTTTGAGCTGGGCTTCCGCAGCGGCGTCTGGCAAAACGCCGTCTTCAGCACCGGCG GCTCGGACGGCACTGTGGGCGGCATCCTGAACAAGAACTTCTACGGCAACGTGGGGAGGATCTACCGCTGGACCGACGGC CCCACCCCCACCCCCGCCGAGGTGGCCTTGAACAACGCGATCCTGCGCGTGGAGGCCGACCCGAACGCCAACGCCGCGCG CCCCGGTGGTCTGCGCTGGATCCCACGGATCAACGGCGAGTTCAGCGTGCCGGTATTGACCCTCCACACCCTGGGTGACT TCTACGTGCCCTTTGCGCATGAGCAAAACTACCGCCTGGCCGCGCAGAAGCACGGCAGCGCCGACCATCTGGTGCAGCGG GCCATCCGCGCCGCTGGGCACTGTGAGTTCGACGGGGCCGAGGTGGTCGAGGCCTTGAACGACCTGGTCCAGTGGGAGAA GACCGGGGTGAAACCTGCCGGGGACGACGTGCTCAACCCGGCAACGGTGGCTGACCCGAACTATGGCTGCCGCTTTACAC GCGTGACCCGGCCTGGCGTGGCTGCCTGCCCGCCGACCCCCTGA
Upstream 100 bases:
>100_bases AATACGGATGTTTTCCCGCGTACCGAAGAAGAAGTAGAAGAGCGGTCCGTTCGTCTGTGTCCCTGCGCCCAGGCTTCACT CTTCTCCCCCCGGAGGCTTT
Downstream 100 bases:
>100_bases AGCCAGCGTTCAGTGTCTGCTCGCTGTTCCTGCTGGCCACAGCACGGTCACCAGCGCGAGGCCCTTCTCCAGCGCGGCGT GAACCGGGCCGCCCACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MAGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGATLYKGTYAGLHGPASYLIEVP DNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWAASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYL IMGVSMGGHIAGAAVEKETLATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVGGILNKNFYGNVGRIYRWTDG PTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGEFSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQR AIRAAGHCEFDGAEVVEALNDLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP
Sequences:
>Translated_467_residues MAGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGATLYKGTYAGLHGPASYLIEVP DNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWAASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYL IMGVSMGGHIAGAAVEKETLATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVGGILNKNFYGNVGRIYRWTDG PTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGEFSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQR AIRAAGHCEFDGAEVVEALNDLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP >Mature_466_residues AGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGATLYKGTYAGLHGPASYLIEVPD NWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWAASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYLI MGVSMGGHIAGAAVEKETLATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKAA LFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVGGILNKNFYGNVGRIYRWTDGP TPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGEFSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQRA IRAAGHCEFDGAEVVEALNDLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49808; Mature: 49677
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGAT CCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LYKGTYAGLHGPASYLIEVPDNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWA HHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCEEE ASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYLIMGVSMGGHIAGAAVEKETL CCCCCCCEEEEECCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCEECCHHHHHHH ATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA HCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVG EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCC GILNKNFYGNVGRIYRWTDGPTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGE CEECCCCCCCCCCEEEECCCCCCCHHHHEECCEEEEEECCCCCCCCCCCCEEEEEECCCC FSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQRAIRAAGHCEFDGAEVVEALN CCCEEEEEEECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH DLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure AGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGAT CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LYKGTYAGLHGPASYLIEVPDNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWA HHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCEEE ASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYLIMGVSMGGHIAGAAVEKETL CCCCCCCEEEEECCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCEECCHHHHHHH ATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA HCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVG EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCC GILNKNFYGNVGRIYRWTDGPTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGE CEECCCCCCCCCCEEEECCCCCCCHHHHEECCEEEEEECCCCCCCCCCCCEEEEEECCCC FSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQRAIRAAGHCEFDGAEVVEALN CCCEEEEEEECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH DLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA