Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94986039

Identifier: 94986039

GI number: 94986039

Start: 2041937

End: 2043340

Strand: Reverse

Name: 94986039

Synonym: Dgeo_1940

Alternate gene names: NA

Gene position: 2043340-2041937 (Counterclockwise)

Preceding gene: 94986043

Following gene: 94986034

Centisome position: 82.82

GC content: 67.52

Gene sequence:

>1404_bases
ATGGCTGGTCTGGCGACCCGTTTGCGCACCCGTCCGGTTCTTGCCCTCACCCTGCTGGCCTGTGGCCTCGCGCTGGGCAG
TTGTGGCCTGTTGTCGCCGCCTGCCGCTGAGACGCGTCCCCAGGACACCCGCACCTTCAAGCCAGTCGAACCTGCGACCA
CGGCCCTGGCTGGAGCAACCCTCTACAAGGGCACCTATGCGGGCCTCCACGGTCCGGCGAGCTACCTGATCGAGGTGCCG
GACAACTGGAACGGCACGCTGGTGATGTATGCGCACGGCTACCGTGGCACCGGGGAGAACCTGACGGTCGATCCACCCGC
CATCCGCCCGTACCTGATTGCCCAGGGGTACGCCTGGGCCGCCAGCAGCTACTCGGCGAACTATTACGACGTGCGGGCGG
GAGTGGAGGACACCAACGCGCTGGCGCTGGCCTTTGGCAAGCTGACGGGCGGGAAGTACCCCGCGCCCAGCAAGTATCTG
ATCATGGGCGTCTCGATGGGCGGGCATATCGCCGGGGCCGCTGTGGAGAAGGAGACCCTCGCCACCGAGCAGAACAAGGT
GAACTATGCGGCGTCCCTGCCCCTTTGCGGCGTGTTGGACGAGACATACGAGTTCCAGTGGTTGGGAGACTACACGCTGG
TCGCCGCGCAGCTCGCCGGACTGGGCGCCCGGACCTACCCCCAGAAGGATTACCCAGCCATCCTGCCCGACATCAAGGCG
GCGCTCTTTACCGACACGTCCGGCCCGCTGTGGCAGGAGAACGCCGGGCAGGGCGCGAAGCTGCGCGAGATCGCCCGCCG
CCTCACCGGTGGTGACCGCCCGGTTTTTGAGCTGGGCTTCCGCAGCGGCGTCTGGCAAAACGCCGTCTTCAGCACCGGCG
GCTCGGACGGCACTGTGGGCGGCATCCTGAACAAGAACTTCTACGGCAACGTGGGGAGGATCTACCGCTGGACCGACGGC
CCCACCCCCACCCCCGCCGAGGTGGCCTTGAACAACGCGATCCTGCGCGTGGAGGCCGACCCGAACGCCAACGCCGCGCG
CCCCGGTGGTCTGCGCTGGATCCCACGGATCAACGGCGAGTTCAGCGTGCCGGTATTGACCCTCCACACCCTGGGTGACT
TCTACGTGCCCTTTGCGCATGAGCAAAACTACCGCCTGGCCGCGCAGAAGCACGGCAGCGCCGACCATCTGGTGCAGCGG
GCCATCCGCGCCGCTGGGCACTGTGAGTTCGACGGGGCCGAGGTGGTCGAGGCCTTGAACGACCTGGTCCAGTGGGAGAA
GACCGGGGTGAAACCTGCCGGGGACGACGTGCTCAACCCGGCAACGGTGGCTGACCCGAACTATGGCTGCCGCTTTACAC
GCGTGACCCGGCCTGGCGTGGCTGCCTGCCCGCCGACCCCCTGA

Upstream 100 bases:

>100_bases
AATACGGATGTTTTCCCGCGTACCGAAGAAGAAGTAGAAGAGCGGTCCGTTCGTCTGTGTCCCTGCGCCCAGGCTTCACT
CTTCTCCCCCCGGAGGCTTT

Downstream 100 bases:

>100_bases
AGCCAGCGTTCAGTGTCTGCTCGCTGTTCCTGCTGGCCACAGCACGGTCACCAGCGCGAGGCCCTTCTCCAGCGCGGCGT
GAACCGGGCCGCCCACTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MAGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGATLYKGTYAGLHGPASYLIEVP
DNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWAASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYL
IMGVSMGGHIAGAAVEKETLATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA
ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVGGILNKNFYGNVGRIYRWTDG
PTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGEFSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQR
AIRAAGHCEFDGAEVVEALNDLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP

Sequences:

>Translated_467_residues
MAGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGATLYKGTYAGLHGPASYLIEVP
DNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWAASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYL
IMGVSMGGHIAGAAVEKETLATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA
ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVGGILNKNFYGNVGRIYRWTDG
PTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGEFSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQR
AIRAAGHCEFDGAEVVEALNDLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP
>Mature_466_residues
AGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGATLYKGTYAGLHGPASYLIEVPD
NWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWAASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYLI
MGVSMGGHIAGAAVEKETLATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKAA
LFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVGGILNKNFYGNVGRIYRWTDGP
TPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGEFSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQRA
IRAAGHCEFDGAEVVEALNDLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49808; Mature: 49677

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGAT
CCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYKGTYAGLHGPASYLIEVPDNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWA
HHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCEEE
ASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYLIMGVSMGGHIAGAAVEKETL
CCCCCCCEEEEECCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCEECCHHHHHHH
ATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA
HCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVG
EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCC
GILNKNFYGNVGRIYRWTDGPTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGE
CEECCCCCCCCCCEEEECCCCCCCHHHHEECCEEEEEECCCCCCCCCCCCEEEEEECCCC
FSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQRAIRAAGHCEFDGAEVVEALN
CCCEEEEEEECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
DLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP
HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AGLATRLRTRPVLALTLLACGLALGSCGLLSPPAAETRPQDTRTFKPVEPATTALAGAT
CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYKGTYAGLHGPASYLIEVPDNWNGTLVMYAHGYRGTGENLTVDPPAIRPYLIAQGYAWA
HHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCEEE
ASSYSANYYDVRAGVEDTNALALAFGKLTGGKYPAPSKYLIMGVSMGGHIAGAAVEKETL
CCCCCCCEEEEECCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCEECCHHHHHHH
ATEQNKVNYAASLPLCGVLDETYEFQWLGDYTLVAAQLAGLGARTYPQKDYPAILPDIKA
HCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
ALFTDTSGPLWQENAGQGAKLREIARRLTGGDRPVFELGFRSGVWQNAVFSTGGSDGTVG
EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCC
GILNKNFYGNVGRIYRWTDGPTPTPAEVALNNAILRVEADPNANAARPGGLRWIPRINGE
CEECCCCCCCCCCEEEECCCCCCCHHHHEECCEEEEEECCCCCCCCCCCCEEEEEECCCC
FSVPVLTLHTLGDFYVPFAHEQNYRLAAQKHGSADHLVQRAIRAAGHCEFDGAEVVEALN
CCCEEEEEEECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
DLVQWEKTGVKPAGDDVLNPATVADPNYGCRFTRVTRPGVAACPPTP
HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA