| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is paaA [H]
Identifier: 94986018
GI number: 94986018
Start: 2021750
End: 2022712
Strand: Reverse
Name: paaA [H]
Synonym: Dgeo_1918
Alternate gene names: 94986018
Gene position: 2022712-2021750 (Counterclockwise)
Preceding gene: 94986019
Following gene: 94986017
Centisome position: 81.98
GC content: 65.01
Gene sequence:
>963_bases ATGACCCAACCGCAGATGATTCATCCCGGTGAGACGCCGGAGCAGCACGCCGCTTTTCAGGCCCGCATCGCGCGCGGCGA GAAGATCGAACCTGGTGACTGGATGCCCGCCGAGTACCGGCGTCAGCTGATCCGTATGATCTCCCAGCACGCGCATTCGG AAGTTGTGGGGATGCTGCCGGAGGGCGAGTGGATTACCCGCGCGCCTACCTTGAAGCGCAAGACCATCCTGATTGCCAAG GTGCAGGATGAGGCCGGGCACGGGCAGTACCTCTACCACGCTGCCGAGACGCTGGGTGTGACCCGCGAGGAGATGCTGGA CGCGCTGCTTTCTGGCAAGGCCAAGTACTCCAGCATCTTCAACTACCCTAGCCTCACCTGGGCGGACGTGGGCATGATCG GCTGGCTGGTGGACGGCGCCGCGATCAAAAACCAGACCATGCTGGCCGGCTGCTCCTACGGCCCTTACTCGCGCGCCATG GTCCGCATCTGCTCCGAGGAAACCTTTCACCACAAGCAGGGCAAGGAGATGATCGTCGCCTACGCGCAGGGCACGCCCGA GCAGAAGCAGATGGCCCAGGACGCGCTGAACCGCTGGTGGTGGCCCGCCCTGATGATGCTTGGCCCGCACGATGCCGACA GCCCCAACACGGGCGCCCTGGTGCAGTGGGGCATCAAACTCAAGACGAACGATGAGGTCAGGCAGGAGTTCATCAATGAG CATGTCCCCGAACTGCTCGAAGCGGGCCTCACCATCCCCGACCCCGACCTGCACCAGGACGAGCAGGGCAACTGGATTCA TGGCCCCATCAACTGGGACGAGTTCTGGGCGGTCGTGAAAGGCCAGCAGGGCCTCCACAGGGAACGCCTCGGCACGCGGC AACAGGCCCACGAGGAGGGCGCCTGGGTGCGGGAAGCGGTACAGGCGTACGCGGCGCGGCAGCTGGGGCAGGCGGCCGAC TGA
Upstream 100 bases:
>100_bases CTAGGCCCCGGCCTTTGTGACCGTGGCGGTATGGACTTTTCGGTCCTTCTTGTACACTGAACCTAACGCTCGTTAGGCCG CTGGATTCAGGAGGGACCCT
Downstream 100 bases:
>100_bases TGACGGACCGGCACGATACCCAGTGGTCACGCTGGGAAGTTTTCAAGCAGGACGCGCCGGGTAAGCCCTATCAGGCCGTC GGGAGCGTTCACGCGGGCGA
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTQPQMIHPGETPEQHAAFQARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEVVGMLPEGEWITRAPTLKRKTILIAK VQDEAGHGQYLYHAAETLGVTREEMLDALLSGKAKYSSIFNYPSLTWADVGMIGWLVDGAAIKNQTMLAGCSYGPYSRAM VRICSEETFHHKQGKEMIVAYAQGTPEQKQMAQDALNRWWWPALMMLGPHDADSPNTGALVQWGIKLKTNDEVRQEFINE HVPELLEAGLTIPDPDLHQDEQGNWIHGPINWDEFWAVVKGQQGLHRERLGTRQQAHEEGAWVREAVQAYAARQLGQAAD
Sequences:
>Translated_320_residues MTQPQMIHPGETPEQHAAFQARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEVVGMLPEGEWITRAPTLKRKTILIAK VQDEAGHGQYLYHAAETLGVTREEMLDALLSGKAKYSSIFNYPSLTWADVGMIGWLVDGAAIKNQTMLAGCSYGPYSRAM VRICSEETFHHKQGKEMIVAYAQGTPEQKQMAQDALNRWWWPALMMLGPHDADSPNTGALVQWGIKLKTNDEVRQEFINE HVPELLEAGLTIPDPDLHQDEQGNWIHGPINWDEFWAVVKGQQGLHRERLGTRQQAHEEGAWVREAVQAYAARQLGQAAD >Mature_319_residues TQPQMIHPGETPEQHAAFQARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEVVGMLPEGEWITRAPTLKRKTILIAKV QDEAGHGQYLYHAAETLGVTREEMLDALLSGKAKYSSIFNYPSLTWADVGMIGWLVDGAAIKNQTMLAGCSYGPYSRAMV RICSEETFHHKQGKEMIVAYAQGTPEQKQMAQDALNRWWWPALMMLGPHDADSPNTGALVQWGIKLKTNDEVRQEFINEH VPELLEAGLTIPDPDLHQDEQGNWIHGPINWDEFWAVVKGQQGLHRERLGTRQQAHEEGAWVREAVQAYAARQLGQAAD
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=301, Percent_Identity=60.4651162790698, Blast_Score=385, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 36130; Mature: 35999
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPQMIHPGETPEQHAAFQARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEVVGMLP CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EGEWITRAPTLKRKTILIAKVQDEAGHGQYLYHAAETLGVTREEMLDALLSGKAKYSSIF CCCEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH NYPSLTWADVGMIGWLVDGAAIKNQTMLAGCSYGPYSRAMVRICSEETFHHKQGKEMIVA CCCCCCHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEE YAQGTPEQKQMAQDALNRWWWPALMMLGPHDADSPNTGALVQWGIKLKTNDEVRQEFINE ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEECCCHHHHHHHHHH HVPELLEAGLTIPDPDLHQDEQGNWIHGPINWDEFWAVVKGQQGLHRERLGTRQQAHEEG HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHCC AWVREAVQAYAARQLGQAAD HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TQPQMIHPGETPEQHAAFQARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEVVGMLP CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EGEWITRAPTLKRKTILIAKVQDEAGHGQYLYHAAETLGVTREEMLDALLSGKAKYSSIF CCCEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH NYPSLTWADVGMIGWLVDGAAIKNQTMLAGCSYGPYSRAMVRICSEETFHHKQGKEMIVA CCCCCCHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEE YAQGTPEQKQMAQDALNRWWWPALMMLGPHDADSPNTGALVQWGIKLKTNDEVRQEFINE ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEECCCHHHHHHHHHH HVPELLEAGLTIPDPDLHQDEQGNWIHGPINWDEFWAVVKGQQGLHRERLGTRQQAHEEG HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHCC AWVREAVQAYAARQLGQAAD HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]