| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986004
Identifier: 94986004
GI number: 94986004
Start: 2001296
End: 2001826
Strand: Reverse
Name: 94986004
Synonym: Dgeo_1904
Alternate gene names: NA
Gene position: 2001826-2001296 (Counterclockwise)
Preceding gene: 94986012
Following gene: 94986002
Centisome position: 81.14
GC content: 71.94
Gene sequence:
>531_bases GTGACGCCCGCCTTTCTGCTGGGTCTGCTGCCGCCGCCCGACCTGGCCGCACGGGTGGAGGCTTTCCGGACGCGCCTCAG GGTATGTGAGAGTACGCCCCACGTGACCGTGAAGGCGCGCAGCGGACTGGACCCGGGCCTAGCCTGGCTGCCGGTGGTGC GGGAGGTGGTCGCGGCGAGCCCGCCGGTCACGCTGTACCTGAGCGGGGCACGAGCTTTTCGGGGCGGACGTGCCGTGTAT CTTGCCGTTCACTCGCCTGAGGCAGTCACGCTGCACCTGCGGTTGCTGGAGGCGCTCAGGCCGCCCACGCGCTTCAGCTA CGAGGGCGCGCACATGACGCCCCACCTGACCCTGGTGCTGAGACGGCGGGAGGTGGACCTGCGCGCGGTGTTGCCCGCGG CCCAGGCGGAGTTTGCCGACCTCGACGTCCGGCTCCTCCCCTTCACTGCGCGGGAGGTATGGCTGCTGCGGAAGCCCGGA CCGGGGGGCCGCTACGTGCCGGAGGAGGGGTGGCCGCTGGGTCAGGGCTGA
Upstream 100 bases:
>100_bases CCGCTGTCCAGAACACTCGGACATCCTGCGAGCTACAGTGGGGCATGTCGGAAAGCCGAAAGGCGCGTGGACAAGAGGAC TTCGGCGCTGCGGAGGCGCG
Downstream 100 bases:
>100_bases ACGCGGCGCACGCCCGTTTCTGTCGCCAGAAACGCCACTCGCAGGTCGTGGGCCTCACTGGGCAGTTTGTCCACCACGAG CGCTTCCCCCACCACCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTPAFLLGLLPPPDLAARVEAFRTRLRVCESTPHVTVKARSGLDPGLAWLPVVREVVAASPPVTLYLSGARAFRGGRAVY LAVHSPEAVTLHLRLLEALRPPTRFSYEGAHMTPHLTLVLRRREVDLRAVLPAAQAEFADLDVRLLPFTAREVWLLRKPG PGGRYVPEEGWPLGQG
Sequences:
>Translated_176_residues MTPAFLLGLLPPPDLAARVEAFRTRLRVCESTPHVTVKARSGLDPGLAWLPVVREVVAASPPVTLYLSGARAFRGGRAVY LAVHSPEAVTLHLRLLEALRPPTRFSYEGAHMTPHLTLVLRRREVDLRAVLPAAQAEFADLDVRLLPFTAREVWLLRKPG PGGRYVPEEGWPLGQG >Mature_175_residues TPAFLLGLLPPPDLAARVEAFRTRLRVCESTPHVTVKARSGLDPGLAWLPVVREVVAASPPVTLYLSGARAFRGGRAVYL AVHSPEAVTLHLRLLEALRPPTRFSYEGAHMTPHLTLVLRRREVDLRAVLPAAQAEFADLDVRLLPFTAREVWLLRKPGP GGRYVPEEGWPLGQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19362; Mature: 19231
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAFLLGLLPPPDLAARVEAFRTRLRVCESTPHVTVKARSGLDPGLAWLPVVREVVAAS CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC PPVTLYLSGARAFRGGRAVYLAVHSPEAVTLHLRLLEALRPPTRFSYEGAHMTPHLTLVL CCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE RRREVDLRAVLPAAQAEFADLDVRLLPFTAREVWLLRKPGPGGRYVPEEGWPLGQG EECCCCEEEECCCCCCHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPAFLLGLLPPPDLAARVEAFRTRLRVCESTPHVTVKARSGLDPGLAWLPVVREVVAAS CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC PPVTLYLSGARAFRGGRAVYLAVHSPEAVTLHLRLLEALRPPTRFSYEGAHMTPHLTLVL CCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE RRREVDLRAVLPAAQAEFADLDVRLLPFTAREVWLLRKPGPGGRYVPEEGWPLGQG EECCCCEEEECCCCCCHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA